Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RBU63_RS02305 Genome accession   NZ_CP133092
Coordinates   505423..505824 (+) Length   133 a.a.
NCBI ID   WP_028688353.1    Uniprot ID   A0A135NUU4
Organism   Pseudomonas mosselii strain JP2-207     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 500423..510824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RBU63_RS02275 - 500585..501589 (-) 1005 WP_062572609.1 aspartate carbamoyltransferase catalytic subunit -
  RBU63_RS02280 pyrR 501602..502120 (-) 519 WP_028688358.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  RBU63_RS02285 ruvX 502172..502597 (-) 426 WP_028688357.1 Holliday junction resolvase RuvX -
  RBU63_RS02290 - 502597..503166 (-) 570 WP_028688356.1 YqgE/AlgH family protein -
  RBU63_RS02295 - 503294..504193 (-) 900 WP_028688355.1 energy transducer TonB -
  RBU63_RS02300 gshB 504284..505237 (-) 954 WP_028688354.1 glutathione synthase -
  RBU63_RS02305 pilG 505423..505824 (+) 402 WP_028688353.1 twitching motility response regulator PilG Regulator
  RBU63_RS02310 pilH 505872..506237 (+) 366 WP_028688352.1 twitching motility response regulator PilH -
  RBU63_RS02315 - 506234..506788 (+) 555 WP_028688351.1 chemotaxis protein CheW -
  RBU63_RS02320 - 506852..508876 (+) 2025 WP_088851767.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14679.98 Da        Isoelectric Point: 6.7123

>NTDB_id=871806 RBU63_RS02305 WP_028688353.1 505423..505824(+) (pilG) [Pseudomonas mosselii strain JP2-207]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHKPRIIFVDVLMPRLDGYQTCAIIKHNNTFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRASVPGFAAQDPHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=871806 RBU63_RS02305 WP_028688353.1 505423..505824(+) (pilG) [Pseudomonas mosselii strain JP2-207]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGACTCCCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGCGAGGC
CGGCTGCGAGGTGATCACCGCCAGTGACGGCTTCGACGCCCTGGCCAAGATCGTCGATCACAAGCCCCGGATCATCTTCG
TCGATGTGTTGATGCCGCGCCTTGACGGTTACCAGACCTGCGCCATCATCAAGCACAACAATACGTTCAAGGACACCCCG
GTGATCCTGCTGTCTTCCCGCGATGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGCTCCGACCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGTGCCAGCGTGCCCGGTTTCGCCGCGCAGGACCCACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A135NUU4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.167

90.226

0.624