Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   K6K02_RS04500 Genome accession   NZ_AP024626
Coordinates   891473..892267 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain BEST3125     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 886473..897267
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6K02_RS04470 (BsBEST3125_08340) sxzA 887312..888343 (+) 1032 WP_003243057.1 iron chelate uptake ABC transporter family permease subunit -
  K6K02_RS04475 (BsBEST3125_08350) yfhB 888458..889339 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  K6K02_RS04480 (BsBEST3125_08360) yfhC 889427..890011 (+) 585 WP_003243940.1 nitroreductase -
  K6K02_RS04485 (BsBEST3125_08370) yfhD 890050..890241 (-) 192 WP_003233561.1 YfhD family protein -
  K6K02_RS04490 yfhE 890308..890418 (-) 111 WP_003223230.1 YfhE family protein -
  K6K02_RS04495 (BsBEST3125_08380) yfhF 890473..891384 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  K6K02_RS04500 (BsBEST3125_08390) recX 891473..892267 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  K6K02_RS04505 (BsBEST3125_08400) yfhH 892269..892583 (+) 315 WP_003244592.1 YfhH family protein -
  K6K02_RS04510 (BsBEST3125_08410) yfhI 892726..893919 (+) 1194 WP_003243500.1 MFS transporter -
  K6K02_RS04515 (BsBEST3125_08420) sspK 893952..894104 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  K6K02_RS04520 (BsBEST3125_08430) yfhJ 894229..894498 (+) 270 WP_003243789.1 YfhJ family protein -
  K6K02_RS04525 (BsBEST3125_08440) yfhK 894643..895161 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  K6K02_RS04530 (BsBEST3125_08450) spdL 895246..895578 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  K6K02_RS04535 (BsBEST3125_08460) ephM 895565..896425 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=87179 K6K02_RS04500 WP_003243354.1 891473..892267(+) (recX) [Bacillus subtilis strain BEST3125]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=87179 K6K02_RS04500 WP_003243354.1 891473..892267(+) (recX) [Bacillus subtilis strain BEST3125]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment