Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   RBH91_RS08595 Genome accession   NZ_CP133085
Coordinates   1728822..1729403 (+) Length   193 a.a.
NCBI ID   WP_307894192.1    Uniprot ID   -
Organism   Bacillus swezeyi strain EA208     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1723822..1734403
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RBH91_RS08565 - 1724124..1724576 (+) 453 WP_307894190.1 flavodoxin -
  RBH91_RS08570 dapD 1724680..1725390 (+) 711 WP_076762208.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  RBH91_RS08575 - 1725461..1726585 (+) 1125 WP_307894191.1 N-acetyldiaminopimelate deacetylase -
  RBH91_RS08580 - 1726649..1726894 (+) 246 WP_076762210.1 YkuS family protein -
  RBH91_RS08585 ahpA 1727187..1727729 (+) 543 WP_076762211.1 biofilm-specific peroxidase AhpA -
  RBH91_RS08590 - 1727818..1728276 (+) 459 WP_076762212.1 TlpA disulfide reductase family protein -
  RBH91_RS08595 rok 1728822..1729403 (+) 582 WP_307894192.1 transcriptional regulator Rok Regulator
  RBH91_RS08600 - 1729551..1730510 (-) 960 WP_307894193.1 sporulation protein -
  RBH91_RS08605 - 1730666..1731253 (+) 588 WP_307894194.1 molybdenum cofactor guanylyltransferase -
  RBH91_RS08610 - 1731368..1732381 (+) 1014 WP_307894195.1 MoeB/ThiF family adenylyltransferase -
  RBH91_RS08615 glp 1732400..1733692 (+) 1293 WP_307894197.1 gephyrin-like molybdotransferase Glp -
  RBH91_RS08620 mobB 1733659..1734195 (+) 537 WP_307894198.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 22239.19 Da        Isoelectric Point: 9.9960

>NTDB_id=871732 RBH91_RS08595 WP_307894192.1 1728822..1729403(+) (rok) [Bacillus swezeyi strain EA208]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDTKKDFRPERKSESLPVLAELAAQEMKSYQQQQ
PQASQKTQQQTSQQASALPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTT
FMQSLIKMYPEVKKPYRGQYILEGEISTETEQQ

Nucleotide


Download         Length: 582 bp        

>NTDB_id=871732 RBH91_RS08595 WP_307894192.1 1728822..1729403(+) (rok) [Bacillus swezeyi strain EA208]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTAGAGCAGCTAAATGAGGCTGAGGTTAAAGTCATTAGGGAGTATCA
AATTGAGCGTGACAATATCTATGCAAAGCTGCGCGAATTGGATCGTCCATCCAGCTTTAATGATACAAAAAAAGATTTTC
GCCCAGAGCGGAAAAGTGAATCGCTCCCGGTTTTAGCTGAATTAGCTGCACAGGAGATGAAAAGCTACCAGCAGCAGCAG
CCGCAAGCATCTCAAAAAACCCAGCAGCAGACTTCTCAGCAAGCCTCCGCACTGCCAGCTGGAATTCCAGACGGTACGAC
AAGGCGCAGAAGGGGTACGGCCCGTCCGGGTTCTAAGGCTGCAAAATTGCGTGAAGCAGCAATTAAAACATTGAAACGCC
ACAACGCGGCAATCAAAAGTTCCGAGCTTCAAAAAGAAATTGAGAAAGAAAGCGGACTCGAGATCCCTAACATGACAACT
TTCATGCAGAGTCTGATTAAAATGTACCCTGAAGTCAAAAAACCGTATCGGGGTCAATATATATTAGAGGGCGAAATCTC
TACTGAGACAGAGCAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

84.043

97.409

0.819