Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   RBH91_RS06605 Genome accession   NZ_CP133085
Coordinates   1381273..1382223 (+) Length   316 a.a.
NCBI ID   WP_307893891.1    Uniprot ID   -
Organism   Bacillus swezeyi strain EA208     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1376273..1387223
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RBH91_RS06575 argF 1377130..1378080 (+) 951 WP_307893889.1 ornithine carbamoyltransferase -
  RBH91_RS06580 - 1378118..1378930 (-) 813 WP_076760308.1 undecaprenyl-diphosphate phosphatase -
  RBH91_RS06585 - 1379113..1379292 (+) 180 WP_076760307.1 YjzC family protein -
  RBH91_RS06590 - 1379368..1379553 (-) 186 WP_076760306.1 YjzD family protein -
  RBH91_RS06595 - 1379794..1380528 (+) 735 WP_076760305.1 hypothetical protein -
  RBH91_RS06600 - 1380610..1381185 (+) 576 WP_307893890.1 hypothetical protein -
  RBH91_RS06605 med 1381273..1382223 (+) 951 WP_307893891.1 BMP family ABC transporter substrate-binding protein Regulator
  RBH91_RS06610 comZ 1382237..1382422 (+) 186 WP_076760302.1 ComZ family protein Regulator
  RBH91_RS06615 - 1382476..1382721 (-) 246 WP_307893892.1 hypothetical protein -
  RBH91_RS06620 - 1382891..1383829 (+) 939 WP_076760300.1 beta-ketoacyl-ACP synthase III -
  RBH91_RS06625 fabF 1383851..1385089 (+) 1239 WP_076760299.1 beta-ketoacyl-ACP synthase II -
  RBH91_RS06630 - 1385175..1385963 (+) 789 WP_307893893.1 DUF2268 domain-containing protein -
  RBH91_RS06635 - 1386133..1387107 (+) 975 WP_307893894.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35056.81 Da        Isoelectric Point: 4.5517

>NTDB_id=871723 RBH91_RS06605 WP_307893891.1 1381273..1382223(+) (med) [Bacillus swezeyi strain EA208]
MVYRLGVIFLILFVLGGCGSSPLTGKIEKVGLLVPDTISDQVWGTKGYKGLLRIQSVFNVDVYYKEGIDNEAAIKMAVED
FRKKGVNLIYGHGSEYEKIFNDICKDYPDIHFVLMNSKAEHDNVTSISLEGKAMGFFGGMTAAHESKSKKIGVLATQKWQ
PEVKGFIEGAQYVDPNIEVITEYVGQWDDAEKAVELYEKMKKTGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDEAYELTADEFNRGALKGGQRTFDMQEGVIEMGAFSPVVDPSFQEEIKGLIEQYKNTNKLPNE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=871723 RBH91_RS06605 WP_307893891.1 1381273..1382223(+) (med) [Bacillus swezeyi strain EA208]
ATGGTGTACAGGCTTGGCGTGATTTTTTTGATTCTCTTTGTTCTGGGCGGCTGCGGATCATCGCCGCTGACAGGGAAAAT
TGAAAAAGTCGGGTTGCTTGTCCCTGATACAATAAGTGATCAAGTATGGGGAACGAAAGGATATAAAGGCTTATTAAGAA
TACAGTCTGTTTTCAATGTCGATGTCTACTATAAAGAAGGGATTGACAATGAAGCAGCAATCAAAATGGCTGTGGAGGAT
TTTCGTAAAAAAGGCGTCAATTTAATCTATGGACATGGAAGCGAATATGAAAAAATATTTAATGACATATGCAAGGACTA
TCCCGATATTCATTTTGTCTTAATGAACAGCAAGGCTGAGCATGACAATGTGACAAGCATCTCCCTTGAAGGAAAAGCGA
TGGGGTTTTTCGGCGGAATGACGGCCGCCCACGAATCAAAGTCAAAGAAAATCGGCGTGCTTGCGACGCAAAAGTGGCAG
CCTGAAGTGAAAGGATTCATTGAAGGCGCGCAATACGTTGATCCGAACATCGAGGTTATCACAGAGTATGTAGGACAGTG
GGATGATGCTGAAAAAGCCGTGGAACTGTATGAAAAAATGAAAAAGACCGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAAGACGGTTTGTACGCCATAGGCTATGTAAGCGACCAGTCGGAGTTG
GGGGAAAACGTCGTTTTGACAAGCACCATCCAGCATGTTGACGAGGCTTACGAACTCACCGCCGACGAATTTAATAGAGG
AGCGCTTAAAGGAGGCCAGCGAACCTTCGACATGCAGGAGGGCGTCATAGAAATGGGCGCGTTCAGCCCGGTCGTCGATC
CATCATTTCAAGAAGAGATCAAAGGGCTGATCGAACAATACAAAAACACAAACAAACTGCCAAATGAATAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.013

99.367

0.636