Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RBH91_RS04920 Genome accession   NZ_CP133085
Coordinates   1059732..1060523 (+) Length   263 a.a.
NCBI ID   WP_307893687.1    Uniprot ID   -
Organism   Bacillus swezeyi strain EA208     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1054732..1065523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RBH91_RS04890 - 1055885..1056784 (+) 900 WP_307894669.1 PhzF family phenazine biosynthesis isomerase -
  RBH91_RS04895 - 1056904..1057482 (+) 579 WP_307893684.1 nitroreductase -
  RBH91_RS04900 - 1057518..1057712 (-) 195 WP_076762436.1 YfhD family protein -
  RBH91_RS04905 - 1057780..1057893 (-) 114 WP_076762437.1 YfhE family protein -
  RBH91_RS04910 - 1057959..1058498 (-) 540 WP_307893685.1 GNAT family N-acetyltransferase -
  RBH91_RS04915 - 1058764..1059663 (-) 900 WP_307893686.1 TIGR01777 family oxidoreductase -
  RBH91_RS04920 recX 1059732..1060523 (+) 792 WP_307893687.1 recombination regulator RecX Regulator
  RBH91_RS04925 - 1060529..1060843 (+) 315 WP_307893688.1 YfhH family protein -
  RBH91_RS04930 - 1060876..1061046 (-) 171 WP_083696897.1 YpzG family protein -
  RBH91_RS04935 - 1061073..1061222 (-) 150 WP_003179924.1 small, acid-soluble spore protein K -
  RBH91_RS04940 - 1061354..1061623 (+) 270 WP_307893689.1 YfhJ family protein -
  RBH91_RS04945 - 1061651..1062757 (+) 1107 WP_307893690.1 FAD-dependent oxidoreductase -
  RBH91_RS04950 - 1062974..1063933 (+) 960 WP_307893691.1 glycosyltransferase family 2 protein -
  RBH91_RS04955 - 1063902..1064303 (+) 402 WP_076762444.1 GtrA family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30538.66 Da        Isoelectric Point: 6.6657

>NTDB_id=871715 RBH91_RS04920 WP_307893687.1 1059732..1060523(+) (recX) [Bacillus swezeyi strain EA208]
MPYITKISSQKNNEERVNIFLDEKYAFSVDLDILVKFDLRKGKELDELDVIEIQYGDDIRKGFNKALDYLSYRMRSTKEV
KDHLKKKGVPDSAVTEIIHMLNEYQYLDDREFAAAYVSTHRKTSGKGPDVLYRELRIKGVDDDIIQEALGSFTFSEQVET
AVKHAGKVVKKGKKLSSKETKQAIEQQLIRKGFSFDVISAALLETDYENEHDAEREALYKQGEKAMRRYSYDGSYETKMK
VKQYLFRKGFSIDMIDQFLDEKG

Nucleotide


Download         Length: 792 bp        

>NTDB_id=871715 RBH91_RS04920 WP_307893687.1 1059732..1060523(+) (recX) [Bacillus swezeyi strain EA208]
ATGCCTTATATTACAAAAATTTCTTCTCAGAAAAACAATGAAGAGCGGGTTAATATATTTCTGGATGAAAAATACGCGTT
CAGCGTTGACCTGGATATTCTCGTCAAATTTGATCTGCGGAAAGGGAAGGAGCTCGATGAGCTTGACGTCATCGAAATCC
AGTATGGCGATGACATCCGCAAAGGGTTTAATAAAGCGCTTGATTATTTATCCTACAGGATGCGCTCAACGAAAGAAGTC
AAAGACCATCTCAAGAAAAAAGGCGTCCCAGATTCTGCGGTGACAGAAATCATACATATGCTGAACGAATATCAATATTT
GGACGACCGGGAATTTGCGGCGGCATATGTCAGCACCCACCGCAAAACGAGCGGCAAAGGGCCAGACGTTCTTTACAGGG
AGCTTCGAATAAAAGGTGTTGATGATGACATCATCCAGGAAGCGCTAGGCTCATTTACCTTTTCGGAACAGGTTGAAACA
GCCGTTAAGCATGCCGGAAAAGTAGTGAAAAAAGGAAAAAAACTGTCCTCTAAAGAGACGAAACAAGCGATCGAACAGCA
GCTCATTCGCAAGGGATTCTCCTTCGATGTCATCTCGGCCGCTCTTTTGGAGACGGATTATGAAAACGAACATGATGCAG
AAAGAGAAGCTCTGTATAAGCAGGGAGAAAAAGCCATGCGGCGCTACAGCTATGACGGTTCTTACGAAACGAAGATGAAG
GTCAAGCAGTATTTGTTTAGAAAAGGTTTTTCGATTGATATGATTGACCAATTTTTGGATGAAAAGGGATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

68.582

99.24

0.681