Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RBH92_RS13020 Genome accession   NZ_CP133083
Coordinates   2747989..2748384 (-) Length   131 a.a.
NCBI ID   WP_307932434.1    Uniprot ID   -
Organism   Nitrosomonas sp. sh817     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2742989..2753384
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RBH92_RS12995 (RBH92_13005) - 2743220..2743747 (-) 528 WP_374049961.1 hypothetical protein -
  RBH92_RS13000 (RBH92_13010) - 2743801..2744418 (-) 618 WP_307932430.1 hypothetical protein -
  RBH92_RS13005 (RBH92_13015) - 2744627..2745889 (-) 1263 WP_307932431.1 methane monooxygenase/ammonia monooxygenase subunit B -
  RBH92_RS13010 (RBH92_13020) - 2745889..2746713 (-) 825 WP_307932432.1 methane monooxygenase/ammonia monooxygenase subunit A -
  RBH92_RS13015 (RBH92_13025) - 2746878..2747687 (-) 810 WP_307932433.1 methane monooxygenase/ammonia monooxygenase subunit C -
  RBH92_RS13020 (RBH92_13030) pilG 2747989..2748384 (-) 396 WP_307932434.1 response regulator Regulator
  RBH92_RS13025 (RBH92_13035) - 2748536..2749993 (-) 1458 WP_307932435.1 TrkH family potassium uptake protein -
  RBH92_RS13030 (RBH92_13040) trkA 2750005..2751456 (-) 1452 WP_307932436.1 Trk system potassium transporter TrkA -
  RBH92_RS13035 (RBH92_13045) - 2751466..2752254 (-) 789 WP_307932437.1 inositol monophosphatase family protein -
  RBH92_RS13040 (RBH92_13050) - 2752257..2752814 (-) 558 WP_307932438.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14533.94 Da        Isoelectric Point: 6.9500

>NTDB_id=871703 RBH92_RS13020 WP_307932434.1 2747989..2748384(-) (pilG) [Nitrosomonas sp. sh817]
MDNTDVLKGIKVMVIDDSNTVRKSAELFLRPLGCDVILAEDGFVAMSKIVDNQPDIIFVDITMPRLDGYQACMLIKKNPN
YQSIPVIMLSSKDGLFDKARGRLAGSDGYLTKPFTAEGLLSIIRTHTLRQN

Nucleotide


Download         Length: 396 bp        

>NTDB_id=871703 RBH92_RS13020 WP_307932434.1 2747989..2748384(-) (pilG) [Nitrosomonas sp. sh817]
GTGGACAATACCGATGTCTTAAAAGGCATTAAGGTTATGGTAATTGACGATAGTAATACAGTTCGGAAAAGCGCCGAGCT
TTTTTTGCGTCCTCTGGGATGTGATGTCATTTTGGCTGAAGACGGTTTTGTAGCGATGTCAAAAATTGTAGATAACCAAC
CCGATATTATTTTTGTTGATATAACAATGCCGAGATTGGATGGGTACCAAGCCTGCATGTTAATTAAGAAGAATCCAAAT
TATCAATCAATTCCGGTTATTATGCTCTCCAGTAAAGATGGCTTATTTGATAAGGCTCGGGGAAGGCTGGCTGGTTCCGA
TGGATATCTGACTAAACCATTTACTGCGGAGGGTTTATTAAGCATAATACGTACCCATACTTTGCGGCAAAATTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

64.754

93.13

0.603