Detailed information NTG0871691

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: RBH92_RS02590
• Genome accession: NZ_CP133083
• Coordinates: 538061..539086 (+)
• Length: 341 a.a.
• NCBI ID: WP_292924738.1
• Uniprot ID: -
• Organism: Nitrosomonas sp. sh817
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 533061..544086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RBH92_RS02565 (RBH92_02570)	-	533696..534037 (-)	342	WP_307933136.1	4a-hydroxytetrahydrobiopterin dehydratase	-
RBH92_RS02570 (RBH92_02575)	-	534034..535290 (-)	1257	WP_307933137.1	M48 family metallopeptidase	-
RBH92_RS02575 (RBH92_02580)	orn	535441..535986 (+)	546	WP_307933138.1	oligoribonuclease	-
RBH92_RS02580 (RBH92_02585)	-	536082..536507 (+)	426	WP_307933139.1	EF-hand domain-containing protein	-
RBH92_RS02585 (RBH92_02590)	-	536582..537985 (-)	1404	WP_307933140.1	pitrilysin family protein	-
RBH92_RS02590 (RBH92_02595)	pilA	538061..539086 (+)	1026	WP_292924738.1	signal recognition particle-docking protein FtsY	Machinery gene
RBH92_RS02595 (RBH92_02600)	ftsE	539111..539764 (+)	654	WP_307933141.1	cell division ATP-binding protein FtsE	-
RBH92_RS02600 (RBH92_02605)	ftsX	539761..540672 (+)	912	WP_307933142.1	permease-like cell division protein FtsX	-
RBH92_RS02605 (RBH92_02610)	rpoH	540782..541627 (+)	846	WP_307933143.1	RNA polymerase sigma factor RpoH	-
RBH92_RS14945	-	541971..542171 (+)	201	WP_374049947.1	Arm DNA-binding domain-containing protein	-
RBH92_RS02615	-	542354..542542 (+)	189	WP_307933144.1	hypothetical protein	-
RBH92_RS02620 (RBH92_02620)	-	543323..543994 (+)	672	WP_307933145.1	response regulator transcription factor	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 36532.64 Da
• Isoelectric Point: 5.1255

>NTDB_id=871691 RBH92_RS02590 WP_292924738.1 538061..539086(+) (pilA) [Nitrosomonas sp. sh817]
MFSFFKSKKDPADSTEIPAPSDTVSESNQEEPVSFASKLKQGLARTRQNLGRQLSGLFGGGKIDEALYEELETILLTSDI
GVSATQQLLEDLRKQVKRDALTDSAQLKQALKASLTALLKPLERSLDTSAHNPFVVMITGVNGVGKTTSIGKLARYFQNQ
GKTVLLAAGDTFRAAAREQLIAWGERNNVVVIAPDSDPDKKSDPAAVIFDAVTSAKARGIDIVLADTAGRLTTQLHLMEE
IKKVKRVIAKALPDAPHEVLLVLDANTGQNALAQVKAFDEALQVTGLILTKLDGTAKGGVVAAIAAQYPQNPPALRFVGV
GEGVDDLRPFDAEEFVDALFD

Nucleotide

• Length: 1026 bp

>NTDB_id=871691 RBH92_RS02590 WP_292924738.1 538061..539086(+) (pilA) [Nitrosomonas sp. sh817]
ATGTTTAGTTTTTTTAAATCTAAAAAAGATCCAGCAGATTCAACTGAAATTCCGGCTCCATCAGACACTGTATCCGAATC
CAATCAGGAAGAACCGGTAAGTTTTGCGAGCAAGCTCAAGCAAGGTCTTGCCCGTACCCGGCAGAATTTAGGCAGGCAGT
TATCCGGTCTGTTCGGCGGCGGTAAAATCGACGAAGCATTATACGAAGAGCTGGAAACCATACTTTTAACATCCGATATT
GGCGTCAGCGCAACGCAGCAACTGCTGGAGGATTTGCGCAAGCAGGTTAAACGCGATGCTTTAACCGATTCCGCGCAATT
GAAGCAAGCGCTCAAGGCATCTTTGACTGCCTTGCTGAAACCGTTGGAGCGGTCATTGGATACCAGCGCGCATAACCCGT
TCGTGGTTATGATTACCGGTGTGAATGGTGTGGGAAAGACAACATCGATCGGTAAGCTTGCCCGGTACTTCCAGAATCAA
GGAAAAACGGTGTTGCTGGCTGCTGGCGATACGTTCCGTGCAGCGGCGCGCGAGCAGTTGATCGCTTGGGGGGAGCGCAA
TAATGTCGTTGTCATAGCGCCCGATAGCGATCCCGACAAAAAAAGCGATCCGGCCGCGGTGATTTTTGATGCAGTTACCT
CAGCCAAAGCGCGCGGTATTGATATCGTGCTGGCGGATACTGCCGGACGATTGACGACGCAGTTGCATTTAATGGAAGAA
ATCAAGAAAGTAAAACGCGTGATCGCCAAGGCGCTGCCCGATGCACCGCACGAAGTGCTGCTGGTATTGGATGCAAACAC
CGGTCAGAACGCGTTAGCGCAAGTGAAAGCATTTGACGAGGCGCTCCAGGTGACCGGTTTGATTCTCACTAAGTTGGACG
GAACGGCCAAAGGCGGGGTCGTTGCGGCAATTGCCGCGCAATACCCGCAAAATCCCCCGGCGCTGCGCTTTGTGGGTGTC
GGTGAAGGCGTGGATGATTTAAGGCCGTTTGACGCGGAAGAATTTGTCGATGCCCTATTCGATTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (133-340)

• SRP54-type protein, helical bundle domain (SRP54_N) (50-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	62.658	92.669	0.581