Detailed information NTG0871452

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RBI10_RS09680
• Genome accession: NZ_CP133047
• Coordinates: 2037257..2038012 (-)
• Length: 251 a.a.
• NCBI ID: WP_032057017.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain A1269
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2032257..2043012

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RBI10_RS09650 (RBI10_09675)	-	2032565..2033005 (-)	441	WP_002121449.1	SRPBCC family protein	-
RBI10_RS09655 (RBI10_09680)	tadA	2033076..2033579 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
RBI10_RS09660 (RBI10_09685)	hibch	2033585..2034709 (-)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
RBI10_RS09665 (RBI10_09690)	ung	2034706..2035419 (-)	714	WP_069119298.1	uracil-DNA glycosylase	-
RBI10_RS09670 (RBI10_09695)	-	2035473..2036069 (-)	597	WP_002121363.1	6-carboxytetrahydropterin synthase	-
RBI10_RS09675 (RBI10_09700)	gspK	2036297..2037256 (-)	960	WP_069119296.1	type II secretion system minor pseudopilin GspK	-
RBI10_RS09680 (RBI10_09705)	xcpW	2037257..2038012 (-)	756	WP_032057017.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RBI10_RS09685 (RBI10_09710)	xcpV	2038012..2038392 (-)	381	WP_032057019.1	type II secretion system minor pseudopilin GspI	Machinery gene
RBI10_RS09690 (RBI10_09715)	-	2038382..2038936 (-)	555	WP_005069534.1	type II secretion system protein	-
RBI10_RS09695 (RBI10_09720)	-	2038943..2039551 (-)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
RBI10_RS09700 (RBI10_09725)	ycfH	2039588..2040361 (-)	774	WP_017399499.1	TatD family hydrolase	-
RBI10_RS09705 (RBI10_09730)	pilZ	2040379..2040720 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
RBI10_RS09710 (RBI10_09735)	holB	2040731..2041711 (-)	981	WP_032057020.1	DNA polymerase III subunit delta'	-
RBI10_RS09715 (RBI10_09740)	kdsB	2041725..2042486 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28696.96 Da
• Isoelectric Point: 9.5669

>NTDB_id=871452 RBI10_RS09680 WP_032057017.1 2037257..2038012(-) (xcpW) [Acinetobacter pittii strain A1269]
MIKNKYFCSPGPASRLAARSEQMMRGYSEQGSSSCTQTKLRFVNPRSGFTLVELLVAIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEINIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=871452 RBI10_RS09680 WP_032057017.1 2037257..2038012(-) (xcpW) [Acinetobacter pittii strain A1269]
ATGATAAAGAATAAATATTTTTGCTCTCCAGGCCCAGCTTCACGTCTTGCGGCACGATCAGAGCAGATGATGAGGGGTTA
CTCCGAGCAAGGCTCTTCGTCTTGCACTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTGCGATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGATTATTTACTAAAAGTCCGTGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAGTATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAATTAATATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGATTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	80	99.602	0.797