Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RBI20_RS15875 Genome accession   NZ_CP133046
Coordinates   3411000..3411401 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain 11066     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3406000..3416401
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RBI20_RS15860 (RBI20_15860) - 3408011..3410047 (-) 2037 WP_005410715.1 methyl-accepting chemotaxis protein -
  RBI20_RS15865 (RBI20_15865) - 3410089..3410619 (-) 531 WP_005410716.1 chemotaxis protein CheW -
  RBI20_RS15870 (RBI20_15870) - 3410619..3410981 (-) 363 WP_005410717.1 response regulator -
  RBI20_RS15875 (RBI20_15875) pilG 3411000..3411401 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  RBI20_RS15880 (RBI20_15880) gshB 3411642..3412589 (+) 948 WP_005410718.1 glutathione synthase -
  RBI20_RS15885 (RBI20_15885) - 3412589..3413473 (+) 885 WP_049459282.1 energy transducer TonB -
  RBI20_RS15890 (RBI20_15890) tsaB 3414054..3414767 (-) 714 WP_099523213.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=871420 RBI20_RS15875 WP_005418455.1 3411000..3411401(-) (pilG) [Stenotrophomonas maltophilia strain 11066]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=871420 RBI20_RS15875 WP_005418455.1 3411000..3411401(-) (pilG) [Stenotrophomonas maltophilia strain 11066]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677