Detailed information NTG0087142

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: BsBEST3145_RS16930
• Genome accession: NZ_AP024625
• Coordinates: 3218910..3219554 (-)
• Length: 214 a.a.
• NCBI ID: WP_003220716.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BEST3109
• Function: promoting transcription of comS (predicted from homology) Competence regulation

Genomic Context

Location: 3213910..3224554

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BsBEST3145_RS16895 (BsBEST3109_32400)	mrpB	3215102..3215533 (+)	432	WP_003228819.1	Na(+)/H(+) antiporter subunit B	-
BsBEST3145_RS16900 (BsBEST3109_32410)	mrpC	3215533..3215874 (+)	342	WP_003220730.1	Na(+)/H(+) antiporter subunit C	-
BsBEST3145_RS16905 (BsBEST3109_32420)	mrpD	3215867..3217348 (+)	1482	WP_003244432.1	Na+/H+ antiporter subunit D	-
BsBEST3145_RS16910 (BsBEST3109_32430)	mrpE	3217354..3217830 (+)	477	WP_003244015.1	Na+/H+ antiporter subunit E	-
BsBEST3145_RS16915 (BsBEST3109_32440)	mrpF	3217830..3218114 (+)	285	WP_003228814.1	Na(+)/H(+) antiporter subunit F1	-
BsBEST3145_RS16920 (BsBEST3109_32450)	mnhG	3218098..3218472 (+)	375	WP_003244302.1	monovalent cation/H(+) antiporter subunit G	-
BsBEST3145_RS16925 (BsBEST3109_32460)	yuxO	3218511..3218891 (-)	381	WP_003228810.1	hotdog fold thioesterase	-
BsBEST3145_RS16930 (BsBEST3109_32470)	comA	3218910..3219554 (-)	645	WP_003220716.1	two-component system response regulator ComA	Regulator
BsBEST3145_RS16935	comP	3219635..3221944 (-)	2310	WP_032723438.1	two-component system sensor histidine kinase ComP	Regulator
BsBEST3145_RS16940 (BsBEST3109_32500)	comX	3221959..3222126 (-)	168	WP_003242801.1	competence pheromone ComX	Regulator
BsBEST3145_RS16945 (BsBEST3109_32510)	comQ	3222114..3223013 (-)	900	WP_003243039.1	ComX modifying isoprenyl transferase ComQ	Regulator
BsBEST3145_RS16950 (BsBEST3109_32520)	degQ	3223198..3223338 (-)	141	WP_003220708.1	degradation enzyme regulation protein DegQ	Regulator
BsBEST3145_RS16955	-	3223560..3223685 (+)	126	WP_003228793.1	hypothetical protein	-
BsBEST3145_RS16960 (BsBEST3109_32530)	-	3223799..3224167 (+)	369	WP_003243784.1	hypothetical protein	-

Sequence

Protein

• Length: 214 a.a.
• Molecular weight: 24128.51 Da
• Isoelectric Point: 4.6857

>NTDB_id=87142 BsBEST3145_RS16930 WP_003220716.1 3218910..3219554(-) (comA) [Bacillus subtilis strain BEST3109]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide

• Length: 645 bp

>NTDB_id=87142 BsBEST3145_RS16930 WP_003220716.1 3218910..3219554(-) (comA) [Bacillus subtilis strain BEST3109]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAGGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, luxR family (GerE) (152-208)

• Response regulator receiver domain (Response_reg) (4-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Bacillus subtilis subsp. subtilis str. 168	100	100	1