Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | BsBEST3145_RS13705 | Genome accession | NZ_AP024625 |
| Coordinates | 2618481..2618891 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis strain BEST3109 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2613847..2665337 | 2618481..2618891 | within | 0 |
Gene organization within MGE regions
Location: 2613847..2665337
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BsBEST3145_RS13680 (BsBEST3109_26240) | yqeF | 2614014..2614745 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| BsBEST3145_RS13685 (BsBEST3109_26250) | cwlH | 2614997..2615749 (-) | 753 | WP_003229963.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| BsBEST3145_RS13690 (BsBEST3109_26260) | yqeD | 2615936..2616562 (+) | 627 | WP_003229962.1 | TVP38/TMEM64 family protein | - |
| BsBEST3145_RS13695 (BsBEST3109_26270) | gnd | 2616581..2617474 (-) | 894 | WP_003229961.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| BsBEST3145_RS13700 (BsBEST3109_26280) | yqeB | 2617726..2618448 (+) | 723 | WP_010886572.1 | hypothetical protein | - |
| BsBEST3145_RS13705 (BsBEST3109_26290) | nucA/comI | 2618481..2618891 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| BsBEST3145_RS13710 (BsBEST3109_26300) | - | 2619087..2619437 (+) | 351 | Protein_2662 | sigma-70 family RNA polymerase sigma factor | - |
| BsBEST3145_RS13715 (BsBEST3109_26310) | spoIVCA | 2619465..2620925 (-) | 1461 | WP_223257626.1 | site-specific DNA recombinase SpoIVCA | - |
| BsBEST3145_RS21970 (BsBEST3109_26320) | - | 2620883..2621061 (-) | 179 | Protein_2664 | hypothetical protein | - |
| BsBEST3145_RS13720 (BsBEST3109_26330) | arsC | 2621416..2621835 (-) | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| BsBEST3145_RS13725 (BsBEST3109_26340) | acr3 | 2621847..2622887 (-) | 1041 | WP_004398718.1 | arsenite efflux transporter Acr3 | - |
| BsBEST3145_RS13730 (BsBEST3109_26350) | arsK | 2622910..2623350 (-) | 441 | WP_003229954.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| BsBEST3145_RS13735 (BsBEST3109_26360) | arsR | 2623411..2623728 (-) | 318 | WP_004399122.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| BsBEST3145_RS13740 (BsBEST3109_26370) | yqcI | 2624100..2624864 (-) | 765 | WP_004398670.1 | YqcI/YcgG family protein | - |
| BsBEST3145_RS13745 (BsBEST3109_26380) | rapE | 2625307..2626434 (+) | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| BsBEST3145_RS13750 (BsBEST3109_26390) | phrE | 2626424..2626558 (+) | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| BsBEST3145_RS13755 (BsBEST3109_26400) | - | 2626668..2626826 (+) | 159 | WP_003245945.1 | hypothetical protein | - |
| BsBEST3145_RS13760 (BsBEST3109_26410) | yqcG | 2627196..2628791 (+) | 1596 | WP_004399034.1 | LXG family T7SS effector endonuclease toxin YqcG | - |
| BsBEST3145_RS13765 (BsBEST3109_26420) | yqcF | 2628806..2629384 (+) | 579 | WP_009967790.1 | type VII secretion system immunity protein YqcF | - |
| BsBEST3145_RS13770 (BsBEST3109_26430) | - | 2629502..2629648 (+) | 147 | WP_009967791.1 | hypothetical protein | - |
| BsBEST3145_RS13775 (BsBEST3109_26440) | - | 2629645..2630007 (-) | 363 | WP_003229947.1 | hypothetical protein | - |
| BsBEST3145_RS13780 (BsBEST3109_26450) | - | 2630023..2630502 (-) | 480 | WP_004399085.1 | hypothetical protein | - |
| BsBEST3145_RS13785 (BsBEST3109_26460) | cwlA | 2630667..2631485 (-) | 819 | WP_003229946.1 | N-acetylmuramoyl-L-alanine amidase CwlA | - |
| BsBEST3145_RS13790 (BsBEST3109_26470) | skhD | 2631530..2631952 (-) | 423 | WP_003246208.1 | holin family protein | - |
| BsBEST3145_RS13795 (BsBEST3109_26480) | xepAK | 2631997..2632890 (-) | 894 | WP_003246010.1 | hypothetical protein | - |
| BsBEST3145_RS13800 (BsBEST3109_26490) | yqcE | 2632978..2633142 (-) | 165 | WP_003229944.1 | XkdX family protein | - |
| BsBEST3145_RS13805 (BsBEST3109_26500) | yqcD | 2633139..2633474 (-) | 336 | WP_009967793.1 | XkdW family protein | - |
| BsBEST3145_RS13810 (BsBEST3109_26510) | yqcC | 2633484..2634584 (-) | 1101 | WP_003229943.1 | pyocin knob domain-containing protein | - |
| BsBEST3145_RS13815 (BsBEST3109_26520) | - | 2634587..2634859 (-) | 273 | WP_003229942.1 | hypothetical protein | - |
| BsBEST3145_RS13820 (BsBEST3109_26530) | yqcA | 2634856..2635434 (-) | 579 | WP_003229941.1 | YmfQ family protein | - |
| BsBEST3145_RS13825 (BsBEST3109_26540) | yqbT | 2635418..2636464 (-) | 1047 | WP_003229940.1 | baseplate J/gp47 family protein | - |
| BsBEST3145_RS13830 (BsBEST3109_26550) | yqbS | 2636457..2636882 (-) | 426 | WP_004398572.1 | DUF2634 domain-containing protein | - |
| BsBEST3145_RS13835 (BsBEST3109_26560) | yqbR | 2636895..2637158 (-) | 264 | WP_003229938.1 | DUF2577 family protein | - |
| BsBEST3145_RS13840 (BsBEST3109_26570) | yqbQ | 2637155..2638135 (-) | 981 | WP_004398524.1 | hypothetical protein | - |
| BsBEST3145_RS13845 (BsBEST3109_26580) | yqbP | 2638148..2638807 (-) | 660 | WP_004398548.1 | LysM peptidoglycan-binding domain-containing protein | - |
| BsBEST3145_RS13850 (BsBEST3109_26590) | yqbO | 2638800..2643557 (-) | 4758 | WP_003246092.1 | phage tail tape measure protein | - |
| BsBEST3145_RS13855 (BsBEST3109_26600) | - | 2643560..2643697 (-) | 138 | WP_003229934.1 | hypothetical protein | - |
| BsBEST3145_RS13860 (BsBEST3109_26610) | - | 2643739..2644188 (-) | 450 | WP_003229933.1 | phage tail assembly chaperone | - |
| BsBEST3145_RS13865 (BsBEST3109_26620) | txpA | 2644334..2644513 (+) | 180 | WP_004398662.1 | type I toxin-antitoxin system toxin TxpA | - |
| BsBEST3145_RS13870 | bsrH | 2644893..2644982 (+) | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| BsBEST3145_RS13875 (BsBEST3109_26640) | yqbM | 2645236..2645679 (-) | 444 | WP_003229930.1 | phage tail tube protein | - |
| BsBEST3145_RS13880 (BsBEST3109_26650) | yqbK | 2645682..2647082 (-) | 1401 | WP_003229929.1 | phage tail sheath family protein | - |
| BsBEST3145_RS13885 (BsBEST3109_26660) | - | 2647083..2647274 (-) | 192 | WP_010886574.1 | hypothetical protein | - |
| BsBEST3145_RS13890 (BsBEST3109_26670) | yqbJ | 2647271..2647708 (-) | 438 | WP_003229927.1 | DUF6838 family protein | - |
| BsBEST3145_RS13895 (BsBEST3109_26680) | yqbI | 2647721..2648224 (-) | 504 | WP_003246050.1 | HK97 gp10 family phage protein | - |
| BsBEST3145_RS13900 (BsBEST3109_26690) | yqbH | 2648221..2648583 (-) | 363 | WP_003229925.1 | YqbH/XkdH family protein | - |
| BsBEST3145_RS13905 (BsBEST3109_26700) | gkpG | 2648580..2648975 (-) | 396 | WP_004398566.1 | DUF3199 family protein | - |
| BsBEST3145_RS13910 (BsBEST3109_26710) | yqbF | 2648979..2649290 (-) | 312 | WP_003229923.1 | YqbF domain-containing protein | - |
| BsBEST3145_RS13915 (BsBEST3109_26720) | skdG | 2649301..2650236 (-) | 936 | WP_003229922.1 | phage major capsid protein | - |
| BsBEST3145_RS13920 (BsBEST3109_26730) | yqbD | 2650255..2651223 (-) | 969 | WP_003229921.1 | XkdF-like putative serine protease domain-containing protein | - |
| BsBEST3145_RS13925 (BsBEST3109_26740) | - | 2651256..2651909 (-) | 654 | WP_003229920.1 | hypothetical protein | - |
| BsBEST3145_RS13930 (BsBEST3109_26750) | yqbB | 2651950..2652867 (-) | 918 | WP_004398748.1 | phage head morphogenesis protein | - |
| BsBEST3145_RS13935 (BsBEST3109_26760) | yqbA | 2652864..2654396 (-) | 1533 | WP_004398894.1 | phage portal protein | - |
| BsBEST3145_RS13940 (BsBEST3109_26770) | stmB | 2654400..2655695 (-) | 1296 | WP_003229917.1 | PBSX family phage terminase large subunit | - |
| BsBEST3145_RS13945 (BsBEST3109_26780) | terS | 2655688..2656407 (-) | 720 | WP_003229916.1 | phage terminase small subunit | - |
| BsBEST3145_RS13950 (BsBEST3109_26790) | - | 2656475..2656939 (-) | 465 | WP_004398685.1 | hypothetical protein | - |
| BsBEST3145_RS13955 (BsBEST3109_26800) | yqaQ | 2657083..2657538 (-) | 456 | WP_004398775.1 | hypothetical protein | - |
| BsBEST3145_RS13960 (BsBEST3109_26810) | - | 2657736..2658665 (+) | 930 | WP_003229913.1 | hypothetical protein | - |
| BsBEST3145_RS13965 (BsBEST3109_26820) | yqaO | 2658739..2658945 (-) | 207 | WP_003229912.1 | XtrA/YqaO family protein | - |
| BsBEST3145_RS13970 (BsBEST3109_26830) | yqaN | 2659027..2659455 (-) | 429 | WP_009967809.1 | RusA family crossover junction endodeoxyribonuclease | - |
| BsBEST3145_RS13975 (BsBEST3109_26840) | - | 2659551..2659700 (-) | 150 | WP_003229910.1 | hypothetical protein | - |
| BsBEST3145_RS13980 (BsBEST3109_26850) | sknM | 2659691..2660632 (-) | 942 | WP_075058863.1 | ATP-binding protein | - |
| BsBEST3145_RS13985 (BsBEST3109_26860) | yqaL | 2660514..2661191 (-) | 678 | WP_010886575.1 | DnaD domain-containing protein | - |
| BsBEST3145_RS13990 (BsBEST3109_26870) | recT | 2661267..2662121 (-) | 855 | WP_003229907.1 | recombinase RecT | - |
| BsBEST3145_RS13995 (BsBEST3109_26880) | yqaJ | 2662124..2663083 (-) | 960 | WP_004398673.1 | YqaJ viral recombinase family protein | - |
| BsBEST3145_RS14000 (BsBEST3109_26890) | - | 2663189..2663383 (-) | 195 | WP_003229905.1 | YqaI family protein | - |
| BsBEST3145_RS14005 (BsBEST3109_26900) | - | 2663343..2663516 (-) | 174 | WP_119123069.1 | hypothetical protein | - |
| BsBEST3145_RS14010 (BsBEST3109_26910) | sknH | 2663513..2663770 (-) | 258 | WP_003245994.1 | YqaH family protein | - |
| BsBEST3145_RS14015 (BsBEST3109_26920) | yqaG | 2663767..2664336 (-) | 570 | WP_004398626.1 | helix-turn-helix transcriptional regulator | - |
| BsBEST3145_RS14020 (BsBEST3109_26930) | - | 2664410..2664550 (-) | 141 | WP_003229902.1 | hypothetical protein | - |
| BsBEST3145_RS14025 (BsBEST3109_26940) | yqaF | 2664580..2664810 (-) | 231 | WP_004398958.1 | helix-turn-helix transcriptional regulator | - |
| BsBEST3145_RS14030 (BsBEST3109_26950) | sknR | 2664987..2665337 (+) | 351 | WP_004398704.1 | transcriptional regulator SknR | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=87133 BsBEST3145_RS13705 WP_009967785.1 2618481..2618891(-) (nucA/comI) [Bacillus subtilis strain BEST3109]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=87133 BsBEST3145_RS13705 WP_009967785.1 2618481..2618891(-) (nucA/comI) [Bacillus subtilis strain BEST3109]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGGGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGTGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGTACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGGGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGTGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGTACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |