Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BsBEST3145_RS07625 Genome accession   NZ_AP024625
Coordinates   1459678..1460253 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain BEST3109     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1454678..1465253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BsBEST3145_RS07595 (BsBEST3109_14320) dapD 1454864..1455574 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  BsBEST3145_RS07600 (BsBEST3109_14330) dapI 1455644..1456768 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  BsBEST3145_RS07605 (BsBEST3109_14340) ykuS 1456830..1457075 (+) 246 WP_003232382.1 YkuS family protein -
  BsBEST3145_RS07610 (BsBEST3109_14350) mscT 1457112..1457915 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  BsBEST3145_RS07615 (BsBEST3109_14360) ahpA 1458152..1458694 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  BsBEST3145_RS07620 (BsBEST3109_14370) ykuV 1458766..1459212 (+) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  BsBEST3145_RS07625 (BsBEST3109_14380) rok 1459678..1460253 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  BsBEST3145_RS07630 (BsBEST3109_14390) cse15 1460294..1461259 (-) 966 WP_003245018.1 spore protein Cse15 -
  BsBEST3145_RS07635 (BsBEST3109_14400) mobA 1461396..1461995 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  BsBEST3145_RS07640 (BsBEST3109_14410) moeB 1462046..1463065 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  BsBEST3145_RS07645 (BsBEST3109_14420) glp 1463083..1464375 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  BsBEST3145_RS07650 (BsBEST3109_14430) mobB 1464336..1464857 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=87111 BsBEST3145_RS07625 WP_003232378.1 1459678..1460253(+) (rok) [Bacillus subtilis strain BEST3109]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=87111 BsBEST3145_RS07625 WP_003232378.1 1459678..1460253(+) (rok) [Bacillus subtilis strain BEST3109]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment