Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   BsBEST3145_RS06145 Genome accession   NZ_AP024625
Coordinates   1195747..1196898 (+) Length   383 a.a.
NCBI ID   WP_003245839.1    Uniprot ID   A0AAE2VB70
Organism   Bacillus subtilis strain BEST3109     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1190747..1201898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BsBEST3145_RS06110 (BsBEST3109_11350) yjbB 1191418..1192635 (+) 1218 WP_010886478.1 MFS transporter -
  BsBEST3145_RS06115 (BsBEST3109_11360) yjbC 1192800..1193378 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  BsBEST3145_RS06120 (BsBEST3109_11370) spx 1193559..1193954 (+) 396 WP_003245483.1 transcriptional regulator Spx -
  BsBEST3145_RS06125 (BsBEST3109_11380) yjbE 1193997..1194653 (-) 657 WP_003232944.1 TerC family protein -
  BsBEST3145_RS06130 - 1194823..1194963 (+) 141 WP_119122854.1 hypothetical protein -
  BsBEST3145_RS06135 (BsBEST3109_11390) mecA 1194930..1195586 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  BsBEST3145_RS06140 - 1195581..1195703 (-) 123 WP_003245684.1 hypothetical protein -
  BsBEST3145_RS06145 coiA 1195747..1196898 (+) 1152 WP_003245839.1 competence protein CoiA Machinery gene
  BsBEST3145_RS06150 (BsBEST3109_11400) pepF 1197128..1198957 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  BsBEST3145_RS06155 (BsBEST3109_11410) - 1198995..1199162 (-) 168 WP_003244944.1 hypothetical protein -
  BsBEST3145_RS06160 (BsBEST3109_11420) spxH 1199476..1200375 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  BsBEST3145_RS06165 (BsBEST3109_11430) bhbI 1200372..1200770 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  BsBEST3145_RS06170 (BsBEST3109_11440) cwlQ 1201025..1201759 (-) 735 WP_003245645.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44755.85 Da        Isoelectric Point: 10.0034

>NTDB_id=87106 BsBEST3145_RS06145 WP_003245839.1 1195747..1196898(+) (coiA) [Bacillus subtilis strain BEST3109]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRSECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=87106 BsBEST3145_RS06145 WP_003245839.1 1195747..1196898(+) (coiA) [Bacillus subtilis strain BEST3109]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCGCCATAGACATCGAGCCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

97.389

0.974


Multiple sequence alignment