Detailed information NTG0870776

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: Q8T15_RS13560
• Genome accession: NZ_CP132922
• Coordinates: 2894225..2895403 (+)
• Length: 392 a.a.
• NCBI ID: WP_306714534.1
• Uniprot ID: -
• Organism: Burkholderia dolosa strain N149
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2889225..2900403

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q8T15_RS13530	-	2889855..2890463 (+)	609	WP_035971697.1	50S ribosomal protein L25/general stress protein Ctc	-
Q8T15_RS13535	pth	2890572..2891171 (+)	600	WP_006763361.1	aminoacyl-tRNA hydrolase	-
Q8T15_RS13540	hisC	2891316..2892383 (+)	1068	WP_212221194.1	histidinol-phosphate transaminase	-
Q8T15_RS13545	-	2892462..2892728 (-)	267	WP_006763359.1	YfhL family 4Fe-4S dicluster ferredoxin	-
Q8T15_RS13550	coaD	2892788..2893285 (-)	498	WP_006398238.1	pantetheine-phosphate adenylyltransferase	-
Q8T15_RS13555	rsmD	2893397..2894011 (-)	615	WP_035971696.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
Q8T15_RS13560	pilA	2894225..2895403 (+)	1179	WP_306714534.1	signal recognition particle-docking protein FtsY	Machinery gene
Q8T15_RS13565	maiA	2895511..2896155 (-)	645	WP_006763356.1	maleylacetoacetate isomerase	-
Q8T15_RS13570	ybiB	2896335..2897309 (+)	975	WP_176077223.1	DNA-binding protein YbiB	-
Q8T15_RS13575	leuA	2897675..2899321 (+)	1647	WP_306714535.1	2-isopropylmalate synthase	-
Q8T15_RS13580	-	2899452..2899835 (-)	384	WP_006763353.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 41668.49 Da
• Isoelectric Point: 4.6918

>NTDB_id=870776 Q8T15_RS13560 WP_306714534.1 2894225..2895403(+) (pilA) [Burkholderia dolosa strain N149]
MFSFFKRFKKTQDSDPAESQPADAPQSDESSDVPQTPDAPQAPAAPQEPAAPQEPAAQPAAPAVVMTVTPTNDGRDEVVE
TVEIVPPPAQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRVGRL
TDPQQVKSALRDLLVELLTPLEKSLVLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLA
VWGERNNVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGAPHEVLLVIDAN
TGQNALTQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFADALLG

Nucleotide

• Length: 1179 bp

>NTDB_id=870776 Q8T15_RS13560 WP_306714534.1 2894225..2895403(+) (pilA) [Burkholderia dolosa strain N149]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGATTCCGATCCCGCGGAATCGCAGCCGGCCGACGCGCCGCAATC
GGACGAGTCGTCCGATGTACCGCAGACGCCCGATGCACCGCAGGCGCCCGCCGCACCGCAGGAGCCCGCCGCACCGCAGG
AGCCCGCCGCGCAACCGGCCGCGCCGGCCGTCGTGATGACCGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAG
ACCGTCGAGATCGTCCCGCCGCCCGCGCAGGATGCGTCCGCGAAGAAATCGTGGCTCGCGCGCCTGAAGACGGGGCTCGC
GAAGACGGGCTCGAGCATCACCGGCGTATTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTTGAAACCGCGT
TGCTGATGTCGGACGCGGGCGTCGACGCGACCGAATACCTGCTCGGCGCGCTGCGCGAAAAAGTGCGCGTGGGCCGGCTG
ACCGATCCGCAGCAGGTGAAGAGCGCGCTGCGCGATCTGCTCGTCGAACTGCTGACGCCGCTCGAGAAATCGCTGGTGCT
CGGCCGCGCGCAGCCGCTCGTGATGATGATCGCGGGCGTGAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGA
AGCATCTGCAGAGCTTCGATCAGTCGGTGCTGCTGGCGGCCGGCGACACGTTCCGTGCAGCGGCGCGCGAACAGCTCGCG
GTCTGGGGCGAGCGCAACAACGTGACGGTCGTGCAGCAGGAAAGCGGCGACCCGGCCGCGGTGATCTTCGATGCGGTCAG
CGCGGCGCGCGCGCGCAAGATCGACGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTGCATCTGATGGAAG
AGCTGAAGAAGGTGAAGCGCGTGATTTCGAAGGCCCACGACGGCGCGCCGCACGAAGTGCTGCTCGTGATCGACGCGAAC
ACGGGCCAGAACGCGCTCACGCAGGTCAAGGCGTTCGACGATGCGCTCGGCCTCACCGGCTTGATCGTCACGAAGCTCGA
CGGCACCGCAAAGGGCGGGATTCTCGCCGCGATCGCGCGGCAGCGGCCGGTGCCGGTCTACTTCATCGGCGTCGGCGAGA
AGGTCGAGGACCTGCAGCCGTTCAGCGCCGAGGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (193-392)

• SRP54-type protein, helical bundle domain (SRP54_N) (110-172)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.125	100	0.564