Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   RA292_RS15650 Genome accession   NZ_CP132912
Coordinates   3027050..3027811 (-) Length   253 a.a.
NCBI ID   WP_306649590.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. natto strain BN-P15-11-1     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3022050..3032811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RA292_RS15610 mrpB 3022517..3022948 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  RA292_RS15615 mrpC 3022948..3023289 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  RA292_RS15620 mrpD 3023282..3024763 (+) 1482 WP_003228817.1 Na+/H+ antiporter subunit D -
  RA292_RS15625 mrpE 3024769..3025245 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  RA292_RS15630 mrpF 3025245..3025529 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  RA292_RS15635 mnhG 3025513..3025887 (+) 375 WP_003228812.1 monovalent cation/H(+) antiporter subunit G -
  RA292_RS15640 yuxO 3025926..3026306 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  RA292_RS15645 comA 3026325..3026969 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  RA292_RS15650 comP 3027050..3027811 (-) 762 WP_306649590.1 HDOD domain-containing protein Regulator
  RA292_RS15655 pdeH 3027827..3028399 (-) 573 Protein_3043 cyclic di-GMP phosphodiesterase -
  RA292_RS15660 pncB 3028536..3030008 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  RA292_RS15665 pncA 3030024..3030575 (-) 552 WP_014477836.1 cysteine hydrolase family protein -
  RA292_RS15670 yueI 3030672..3031070 (-) 399 WP_019712929.1 YueI family protein -
  RA292_RS15675 yueH 3031142..3031390 (-) 249 WP_003228783.1 YueH family protein -
  RA292_RS15680 yueG 3031463..3031684 (-) 222 WP_014477839.1 spore germination protein -

Sequence

Protein


Download         Length: 253 a.a.        Molecular weight: 29221.73 Da        Isoelectric Point: 9.3784

>NTDB_id=870671 RA292_RS15650 WP_306649590.1 3027050..3027811(-) (comP) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
MISGHDLSTHFYSYYELLNELSKEQPNIKRVTEYIERDLSLSYQILKFLNSSHSRLSQKIESIQQAIMLLGFNEIKRWIY
ILSFKDLSRKGHSSKHEIIKISLIRAKLCELLARKTSRPQLLYDLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLD
SQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETS
EGKGFKADIEIEL

Nucleotide


Download         Length: 762 bp        

>NTDB_id=870671 RA292_RS15650 WP_306649590.1 3027050..3027811(-) (comP) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
ATCATCAGCGGGCATGACCTATCGACTCATTTCTATTCTTACTATGAACTGCTTAACGAACTGAGCAAAGAGCAGCCTAA
CATAAAGCGTGTGACAGAGTACATAGAGCGGGATTTATCACTGTCCTATCAGATTTTAAAATTTTTAAACTCATCCCACA
GCCGTTTGAGCCAGAAAATTGAAAGCATTCAACAGGCCATTATGCTGCTGGGATTTAATGAAATCAAACGGTGGATATAT
ATTCTTTCCTTTAAGGATTTAAGCAGGAAAGGGCATTCCAGCAAGCACGAAATCATTAAGATTTCTTTGATAAGAGCAAA
GCTTTGCGAACTGCTGGCGAGAAAGACATCCCGGCCGCAGCTTCTGTATGATCTTGGGCTGGTCAAGGCGCTGTCGAAGT
TGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCACATTCGTTTAAATACCGGAAGATTTACGGCTTCCCTTGATCTGGAT
TCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGGCGACGGATGTGCTGAT
TATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTTGGGTTTGATCAGGAAAAGAATACTG
AGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCTTCGGATTGAAACAAGT
GAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA

Domains

Predicted by InterproScan.

HDOD domain (HDOD)

(14-137)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(163-249)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

92.157

60.474

0.557