Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   RA292_RS11590 Genome accession   NZ_CP132912
Coordinates   2291530..2292333 (-) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. natto strain BN-P15-11-1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2286530..2297333
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RA292_RS11565 glpQB 2287676..2288407 (-) 732 WP_003230288.1 glycerophosphodiester phosphodiesterase -
  RA292_RS11570 yqiI 2288486..2289106 (-) 621 WP_010886565.1 N-acetylmuramoyl-L-alanine amidase -
  RA292_RS11575 yqiH 2289121..2289414 (-) 294 WP_003230284.1 lipoprotein -
  RA292_RS11580 - 2289722..2289874 (+) 153 WP_003230276.1 hypothetical protein -
  RA292_RS11585 yqiG 2289947..2291065 (+) 1119 WP_004398691.1 NADH-dependent flavin oxidoreductase -
  RA292_RS11590 spo0A 2291530..2292333 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  RA292_RS11595 spoIVB 2292609..2293889 (-) 1281 WP_004398697.1 SpoIVB peptidase -
  RA292_RS11600 recN 2294064..2295794 (-) 1731 WP_003230267.1 DNA repair protein RecN Machinery gene
  RA292_RS11605 argR 2295831..2296280 (-) 450 WP_003230265.1 arginine repressor ArgR -
  RA292_RS11610 yqxC 2296378..2297223 (-) 846 WP_003230264.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=870646 RA292_RS11590 WP_003226427.1 2291530..2292333(-) (spo0A) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=870646 RA292_RS11590 WP_003226427.1 2291530..2292333(-) (spo0A) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATCTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTTGGTTATACTGTC
AGCATGACAAAAGCTAAACCTACCAACAGTGAATTCATTGCAATGGTTGCGGATAAGCTGAGGTTAGAGCATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1