Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   RA292_RS07265 Genome accession   NZ_CP132912
Coordinates   1401695..1402270 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. natto strain BN-P15-11-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1396695..1407270
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RA292_RS07235 dapD 1396881..1397591 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  RA292_RS07240 dapI 1397661..1398785 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  RA292_RS07245 ykuS 1398847..1399092 (+) 246 WP_003232382.1 YkuS family protein -
  RA292_RS07250 mscT 1399129..1399932 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  RA292_RS07255 ahpA 1400169..1400711 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  RA292_RS07260 ykuV 1400783..1401229 (+) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  RA292_RS07265 rok 1401695..1402270 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  RA292_RS07270 cse15 1402311..1403276 (-) 966 WP_003245018.1 spore protein Cse15 -
  RA292_RS07275 mobA 1403413..1404012 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  RA292_RS07280 moeB 1404063..1405082 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  RA292_RS07285 glp 1405100..1406392 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  RA292_RS07290 mobB 1406353..1406874 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=870639 RA292_RS07265 WP_003232378.1 1401695..1402270(+) (rok) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=870639 RA292_RS07265 WP_003232378.1 1401695..1402270(+) (rok) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1