Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   RA292_RS07150 Genome accession   NZ_CP132912
Coordinates   1382468..1382932 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis subsp. natto strain BN-P15-11-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1377468..1387932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RA292_RS07130 kinA 1377934..1379754 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  RA292_RS07135 dapX 1379765..1380946 (-) 1182 WP_003232415.1 aminotransferase A -
  RA292_RS07140 - 1381148..1381309 (-) 162 WP_003245246.1 hypothetical protein -
  RA292_RS07145 cheV 1381513..1382424 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  RA292_RS07150 kre 1382468..1382932 (-) 465 WP_003232406.1 YkyB family protein Regulator
  RA292_RS07155 ykuC 1383058..1384350 (-) 1293 WP_003245267.1 MFS transporter -
  RA292_RS07160 ltdD 1384426..1384920 (-) 495 WP_010886500.1 L,D-transpeptidase family protein -
  RA292_RS07165 ppeE 1384977..1385837 (-) 861 WP_003232400.1 metallophosphoesterase -
  RA292_RS07170 fadH 1385980..1386744 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=870638 RA292_RS07150 WP_003232406.1 1382468..1382932(-) (kre) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=870638 RA292_RS07150 WP_003232406.1 1382468..1382932(-) (kre) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1