Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   RA292_RS05755 Genome accession   NZ_CP132912
Coordinates   1135813..1136964 (+) Length   383 a.a.
NCBI ID   WP_003245839.1    Uniprot ID   A0AAE2VB70
Organism   Bacillus subtilis subsp. natto strain BN-P15-11-1     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1130813..1141964
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RA292_RS05720 yjbB 1131485..1132702 (+) 1218 WP_010886478.1 MFS transporter -
  RA292_RS05725 yjbC 1132866..1133444 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  RA292_RS05730 spx 1133625..1134020 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  RA292_RS05735 yjbE 1134063..1134719 (-) 657 WP_003232944.1 TerC family protein -
  RA292_RS05740 - 1134889..1135029 (+) 141 WP_119122854.1 hypothetical protein -
  RA292_RS05745 mecA 1134996..1135652 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  RA292_RS05750 - 1135647..1135769 (-) 123 WP_003245684.1 hypothetical protein -
  RA292_RS05755 coiA 1135813..1136964 (+) 1152 WP_003245839.1 competence protein CoiA Machinery gene
  RA292_RS05760 pepF 1137194..1139023 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  RA292_RS05765 - 1139061..1139228 (-) 168 WP_003244944.1 hypothetical protein -
  RA292_RS05770 spxH 1139542..1140441 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  RA292_RS05775 bhbI 1140438..1140836 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  RA292_RS05780 cwlQ 1141091..1141825 (-) 735 WP_003245645.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44755.85 Da        Isoelectric Point: 10.0034

>NTDB_id=870634 RA292_RS05755 WP_003245839.1 1135813..1136964(+) (coiA) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRSECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=870634 RA292_RS05755 WP_003245839.1 1135813..1136964(+) (coiA) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCGCCATAGACATCGAGCCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

97.389

0.974