Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   RA106_RS09590 Genome accession   NZ_CP132900
Coordinates   1851346..1852113 (+) Length   255 a.a.
NCBI ID   WP_011681768.1    Uniprot ID   A0A0E2PYL2
Organism   Streptococcus thermophilus strain CICC 20372     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1846346..1857113
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RA106_RS09575 (RA106_09565) - 1848662..1849345 (-) 684 WP_011226711.1 YoaK family protein -
  RA106_RS09580 (RA106_09570) rlmH 1849361..1849840 (-) 480 WP_011681766.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  RA106_RS09585 (RA106_09575) htrA 1850045..1851280 (+) 1236 WP_014727759.1 S1C family serine protease Regulator
  RA106_RS09590 (RA106_09580) spo0J 1851346..1852113 (+) 768 WP_011681768.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29447.80 Da        Isoelectric Point: 9.4740

>NTDB_id=870575 RA106_RS09590 WP_011681768.1 1851346..1852113(+) (spo0J) [Streptococcus thermophilus strain CICC 20372]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNVLRLLQLPREIQTSIENGSLSQG
HARALLAIEDSQKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=870575 RA106_RS09590 WP_011681768.1 1851346..1852113(+) (spo0J) [Streptococcus thermophilus strain CICC 20372]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGTTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCAAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTCTCCCTATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2PYL2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569