Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   K6J91_RS06040 Genome accession   NZ_AP024624
Coordinates   1173378..1173569 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain BEST3106     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1168378..1178569
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6J91_RS06010 (BsBEST3106_11100) argF 1169242..1170201 (+) 960 WP_003232980.1 ornithine carbamoyltransferase -
  K6J91_RS06015 (BsBEST3106_11110) yjzC 1170287..1170466 (+) 180 WP_003245356.1 YjzC family protein -
  K6J91_RS06020 (BsBEST3106_11120) yjzD 1170512..1170697 (-) 186 WP_003245236.1 YjzD family protein -
  K6J91_RS06025 (BsBEST3106_11130) - 1170946..1171680 (+) 735 WP_003245223.1 hypothetical protein -
  K6J91_RS06030 (BsBEST3106_11140) - 1171762..1172319 (+) 558 WP_003232974.1 hypothetical protein -
  K6J91_RS06035 (BsBEST3106_11150) med 1172410..1173363 (+) 954 WP_003245494.1 transcriptional regulator Med Regulator
  K6J91_RS06040 (BsBEST3106_11160) comZ 1173378..1173569 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  K6J91_RS06045 (BsBEST3106_11170) yjzB 1173599..1173838 (-) 240 WP_003232972.1 spore coat protein YjzB -
  K6J91_RS06050 (BsBEST3106_11180) fabH 1174003..1174941 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  K6J91_RS06055 (BsBEST3106_11190) fabF 1174964..1176205 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  K6J91_RS06060 (BsBEST3106_11200) yjaZ 1176281..1177066 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  K6J91_RS06065 (BsBEST3106_11210) appD 1177258..1178244 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=87016 K6J91_RS06040 WP_003224559.1 1173378..1173569(+) (comZ) [Bacillus subtilis strain BEST3106]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=87016 K6J91_RS06040 WP_003224559.1 1173378..1173569(+) (comZ) [Bacillus subtilis strain BEST3106]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment