Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | K6J91_RS01920 | Genome accession | NZ_AP024624 |
| Coordinates | 358507..358956 (-) | Length | 149 a.a. |
| NCBI ID | WP_003246436.1 | Uniprot ID | A0AAE2SFQ0 |
| Organism | Bacillus subtilis strain BEST3106 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 353507..363956
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J91_RS01885 (BsBEST3106_03260) | yckA | 353658..354338 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| K6J91_RS01890 (BsBEST3106_03270) | yckB | 354348..355211 (-) | 864 | WP_009966510.1 | transporter substrate-binding domain-containing protein | - |
| K6J91_RS01895 | - | 355373..355570 (+) | 198 | WP_119122841.1 | hypothetical protein | - |
| K6J91_RS01900 (BsBEST3106_03290) | yckC | 355589..356044 (+) | 456 | WP_003246356.1 | RDD family protein | - |
| K6J91_RS01905 (BsBEST3106_03300) | yckD | 356126..356458 (+) | 333 | WP_003246247.1 | YckD family protein | - |
| K6J91_RS01910 (BsBEST3106_03310) | bglC | 356612..358045 (+) | 1434 | WP_003246242.1 | 6-phospho-beta-glucosidase | - |
| K6J91_RS01915 (BsBEST3106_03320) | nin/comJ | 358082..358480 (-) | 399 | WP_003246342.1 | DNA-entry nuclease inhibitor | Regulator |
| K6J91_RS01920 (BsBEST3106_03330) | nucA/comI | 358507..358956 (-) | 450 | WP_003246436.1 | DNA-entry nuclease | Machinery gene |
| K6J91_RS01925 (BsBEST3106_03340) | tlpC | 359124..360845 (-) | 1722 | WP_003246498.1 | methyl-accepting chemotaxis protein TlpC | - |
| K6J91_RS01930 (BsBEST3106_03350) | hxlB | 360956..361513 (-) | 558 | WP_003246343.1 | 6-phospho-3-hexuloisomerase | - |
| K6J91_RS01935 (BsBEST3106_03360) | hxlA | 361519..362151 (-) | 633 | WP_003246452.1 | 3-hexulose-6-phosphate synthase | - |
| K6J91_RS01940 (BsBEST3106_03370) | hxlR | 362384..362746 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16486.48 Da Isoelectric Point: 4.6274
>NTDB_id=86997 K6J91_RS01920 WP_003246436.1 358507..358956(-) (nucA/comI) [Bacillus subtilis strain BEST3106]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=86997 K6J91_RS01920 WP_003246436.1 358507..358956(-) (nucA/comI) [Bacillus subtilis strain BEST3106]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |