Detailed information NTG0868950

Bioinformatically predicted

Overview

• Name: vraS
• Type: Regulator
• Locus tag: RAM42_RS05015
• Genome accession: NZ_CP132389
• Coordinates: 1029823..1030866 (+)
• Length: 347 a.a.
• NCBI ID: WP_014613481.1
• Uniprot ID: -
• Organism: Staphylococcus pseudintermedius strain CUVET16-793
• Function: repress expression of competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1024823..1035866

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RAM42_RS04990 (RAM42_04945)	-	1025078..1025800 (+)	723	WP_014613476.1	type 1 glutamine amidotransferase	-
RAM42_RS04995 (RAM42_04950)	-	1026769..1027767 (-)	999	WP_014613477.1	FUSC family protein	-
RAM42_RS05000 (RAM42_04955)	map	1027864..1028625 (+)	762	WP_014613478.1	type I methionyl aminopeptidase	-
RAM42_RS05005 (RAM42_04960)	-	1028723..1029112 (+)	390	WP_014613479.1	hypothetical protein	-
RAM42_RS05010 (RAM42_04965)	liaF	1029125..1029826 (+)	702	WP_412549406.1	cell wall-active antibiotics response protein LiaF	-
RAM42_RS05015 (RAM42_04970)	vraS	1029823..1030866 (+)	1044	WP_014613481.1	sensor histidine kinase	Regulator
RAM42_RS05020 (RAM42_04975)	vraR	1030856..1031485 (+)	630	WP_014613482.1	response regulator transcription factor	Regulator
RAM42_RS05025 (RAM42_04980)	-	1032052..1032633 (-)	582	WP_070407816.1	beta-class carbonic anhydrase	-
RAM42_RS05030 (RAM42_04985)	-	1032666..1034003 (-)	1338	WP_015729387.1	YihY/virulence factor BrkB family protein	-
RAM42_RS05035 (RAM42_04990)	-	1034219..1034506 (-)	288	WP_014613485.1	YtxH domain-containing protein	-
RAM42_RS05040 (RAM42_04995)	-	1034514..1034972 (-)	459	WP_014613486.1	low molecular weight protein-tyrosine-phosphatase	-
RAM42_RS05045 (RAM42_05000)	-	1035106..1035309 (+)	204	WP_014613487.1	DUF1128 family protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 39939.24 Da
• Isoelectric Point: 5.0435

>NTDB_id=868950 RAM42_RS05015 WP_014613481.1 1029823..1030866(+) (vraS) [Staphylococcus pseudintermedius strain CUVET16-793]
MNHYVRAIGSMLILVYSMLTAFFFIDKVFTNIIFFQGMFYTQILGIPVFIFLNLVVIFLCIIVGSVLAYKINQQNDWLKQ
QIVRAFEGETVGINDQQLELYNETIELYQALVPLNQELHKMRIKTQNLTNETYNLNDLKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETDLAPPLDQQIPTLEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIKSLVTDLQRKVPIKVVQEI
DEFEVPKGIEDHLFRITQEAISNTLRHAEGTQVTVELLNRNDYLLLRIQDDGIGFNVDEKLEQSYGLKNMRERAIEIGAT
FHIVSLPDAGTRIEVKAPLEKEEQHDN

Nucleotide

• Length: 1044 bp

>NTDB_id=868950 RAM42_RS05015 WP_014613481.1 1029823..1030866(+) (vraS) [Staphylococcus pseudintermedius strain CUVET16-793]
ATGAATCACTACGTCCGAGCGATAGGTTCGATGCTCATTCTCGTATATAGTATGCTCACCGCGTTTTTCTTTATTGACAA
AGTGTTCACCAATATTATTTTCTTTCAAGGCATGTTTTATACACAAATTTTAGGTATTCCTGTTTTTATCTTTTTAAATT
TAGTCGTCATTTTTTTATGTATTATTGTGGGCAGTGTGTTAGCTTATAAAATCAATCAACAAAATGATTGGCTCAAGCAA
CAAATCGTTCGTGCCTTTGAAGGTGAAACAGTGGGCATCAATGATCAACAACTCGAGCTGTATAATGAAACGATTGAATT
ATATCAAGCACTCGTCCCATTAAATCAAGAATTGCATAAAATGCGAATTAAAACACAAAATTTAACGAATGAAACGTATA
ATTTAAATGATTTGAAGGTGAAAAAGATTATAGAAGATGAACGACAGCGTTTAGCACGAGAATTGCATGATAGTGTGTCG
CAACAACTTTTCGCGGCAAGTATGATGTTGTCTGCAATCAAAGAAACAGATTTAGCACCACCGTTAGACCAACAAATTCC
AACGTTAGAAAAAATGGTGCAAGACTCACAACTTGAAATGCGCGCTCTGTTACTTCACTTGAGACCTATAGGATTGAAGG
ACAAATCGTTAGGTGAGGGAATTAAATCGCTTGTGACGGATCTACAACGTAAAGTACCCATTAAAGTCGTGCAAGAAATT
GATGAGTTTGAAGTACCTAAAGGCATTGAGGATCACCTTTTTAGAATTACCCAAGAAGCGATTTCCAATACGTTACGACA
TGCTGAGGGGACGCAAGTAACGGTAGAATTACTTAACCGCAATGATTATTTATTGTTGCGTATACAAGATGACGGCATTG
GATTTAATGTCGATGAAAAGTTAGAACAAAGTTATGGATTAAAAAATATGCGTGAACGTGCAATAGAGATTGGTGCCACA
TTTCATATCGTCTCATTACCTGATGCGGGGACGAGAATAGAAGTGAAAGCACCACTTGAAAAGGAGGAACAGCATGACAA
TTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (249-341)

• Histidine kinase (HisKA_3) (147-210)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
vraS	Staphylococcus aureus N315	83.862	100	0.839