Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | RAM31_RS08900 | Genome accession | NZ_CP132368 |
| Coordinates | 1891343..1891642 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain UNC_SA44 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1886343..1896642
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RAM31_RS08875 (RAM31_08870) | gcvPA | 1887555..1888901 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| RAM31_RS08880 (RAM31_08875) | gcvT | 1888921..1890012 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RAM31_RS08885 (RAM31_08880) | - | 1890171..1890695 (-) | 525 | WP_001015121.1 | shikimate kinase | - |
| RAM31_RS08890 (RAM31_08885) | - | 1890685..1890831 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| RAM31_RS08895 (RAM31_08890) | comGF | 1890928..1891425 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RAM31_RS08900 (RAM31_08895) | comGE | 1891343..1891642 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| RAM31_RS08905 (RAM31_08900) | comGD | 1891629..1892075 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RAM31_RS08910 (RAM31_08905) | comGC | 1892053..1892364 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RAM31_RS08915 (RAM31_08910) | comGB | 1892378..1893448 (-) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RAM31_RS08920 (RAM31_08915) | comGA | 1893420..1894394 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RAM31_RS08925 (RAM31_08920) | - | 1894446..1895069 (-) | 624 | WP_001223010.1 | MBL fold metallo-hydrolase | - |
| RAM31_RS08930 (RAM31_08925) | - | 1895066..1895395 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RAM31_RS08935 (RAM31_08930) | - | 1895395..1896381 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| RAM31_RS08940 (RAM31_08935) | - | 1896378..1896581 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=868622 RAM31_RS08900 WP_000844413.1 1891343..1891642(-) (comGE) [Staphylococcus aureus strain UNC_SA44]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=868622 RAM31_RS08900 WP_000844413.1 1891343..1891642(-) (comGE) [Staphylococcus aureus strain UNC_SA44]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |