Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   RAM29_RS09480 Genome accession   NZ_CP132367
Coordinates   1962727..1963392 (+) Length   221 a.a.
NCBI ID   WP_000697877.1    Uniprot ID   A0A0D1JN68
Organism   Staphylococcus aureus strain UNC_SA48     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1957727..1968392
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RAM29_RS09455 (RAM29_09455) - 1959135..1959896 (+) 762 WP_000323441.1 alpha/beta hydrolase family protein -
  RAM29_RS09460 (RAM29_09460) - 1960141..1960596 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  RAM29_RS09465 (RAM29_09465) - 1960718..1960819 (+) 102 WP_000731976.1 SE2200 family small protein -
  RAM29_RS09470 (RAM29_09470) - 1960879..1962303 (-) 1425 WP_153100543.1 alkaline phosphatase -
  RAM29_RS09475 (RAM29_09475) - 1962501..1962701 (+) 201 WP_000604730.1 hypothetical protein -
  RAM29_RS09480 (RAM29_09480) braR 1962727..1963392 (+) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  RAM29_RS09485 (RAM29_09485) braS 1963403..1964290 (+) 888 WP_000143425.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  RAM29_RS09490 (RAM29_09490) - 1964398..1965153 (+) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  RAM29_RS09495 (RAM29_09495) - 1965150..1967150 (+) 2001 WP_000776750.1 ABC transporter permease -
  RAM29_RS09500 (RAM29_09500) - 1967809..1967922 (+) 114 Protein_1825 hypothetical protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25415.49 Da        Isoelectric Point: 4.7961

>NTDB_id=868593 RAM29_RS09480 WP_000697877.1 1962727..1963392(+) (braR) [Staphylococcus aureus strain UNC_SA48]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=868593 RAM29_RS09480 WP_000697877.1 1962727..1963392(+) (braR) [Staphylococcus aureus strain UNC_SA48]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1JN68

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

100

100

1