Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | RAM29_RS01850 | Genome accession | NZ_CP132367 |
| Coordinates | 344016..344315 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844410.1 | Uniprot ID | A0A7R6NZL1 |
| Organism | Staphylococcus aureus strain UNC_SA48 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 339016..349315
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RAM29_RS01810 (RAM29_01810) | - | 339077..339280 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| RAM29_RS01815 (RAM29_01815) | - | 339277..340263 (+) | 987 | WP_000161311.1 | ROK family glucokinase | - |
| RAM29_RS01820 (RAM29_01820) | - | 340263..340592 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RAM29_RS01825 (RAM29_01825) | - | 340589..341212 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| RAM29_RS01830 (RAM29_01830) | comGA | 341264..342238 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RAM29_RS01835 (RAM29_01835) | comGB | 342210..343280 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RAM29_RS01840 (RAM29_01840) | comGC | 343294..343605 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RAM29_RS01845 (RAM29_01845) | comGD | 343583..344029 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RAM29_RS01850 (RAM29_01850) | comGE | 344016..344315 (+) | 300 | WP_000844410.1 | hypothetical protein | Machinery gene |
| RAM29_RS01855 (RAM29_01855) | comGF | 344233..344730 (+) | 498 | WP_001788897.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RAM29_RS01860 (RAM29_01860) | - | 344827..344973 (+) | 147 | WP_001792109.1 | hypothetical protein | - |
| RAM29_RS01865 (RAM29_01865) | - | 344963..345487 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| RAM29_RS01870 (RAM29_01870) | gcvT | 345646..346737 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RAM29_RS01875 (RAM29_01875) | gcvPA | 346757..348103 (+) | 1347 | WP_000019691.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11079.18 Da Isoelectric Point: 9.9215
>NTDB_id=868575 RAM29_RS01850 WP_000844410.1 344016..344315(+) (comGE) [Staphylococcus aureus strain UNC_SA48]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=868575 RAM29_RS01850 WP_000844410.1 344016..344315(+) (comGE) [Staphylococcus aureus strain UNC_SA48]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |