Detailed information NTG0868434

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHP32_RS05625
• Genome accession: NZ_CP148227
• Coordinates: 1083765..1084724 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: Q0P9A8
• Organism: Campylobacter jejuni strain Z1323CCJ0040
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1078765..1089724

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHP32_RS05600 (WHP32_05600)	neuC	1079329..1080444 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
WHP32_RS05605 (WHP32_05605)	-	1080441..1081355 (+)	915	Protein_1083	beta-1,4-N-acetylgalactosaminyltransferase	-
WHP32_RS05610 (WHP32_05610)	-	1081389..1082051 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
WHP32_RS05615 (WHP32_05615)	-	1082046..1082898 (-)	853	Protein_1085	glycosyltransferase	-
WHP32_RS05620 (WHP32_05620)	waaV	1082882..1083706 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
WHP32_RS05625 (WHP32_05625)	waaF	1083765..1084724 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
WHP32_RS05630 (WHP32_05630)	gmhA	1084705..1085265 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
WHP32_RS05635 (WHP32_05635)	rfaE1	1085262..1086647 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHP32_RS05640 (WHP32_05640)	rfaD	1086640..1087593 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
WHP32_RS05645 (WHP32_05645)	gmhB	1087594..1088154 (-)	561	WP_052782596.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHP32_RS05650 (WHP32_05650)	-	1088235..1088537 (+)	303	WP_002852762.1	cytochrome c	-
WHP32_RS05655 (WHP32_05655)	ccoS	1088560..1088766 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=868434 WHP32_RS05625 WP_002875425.1 1083765..1084724(+) (waaF) [Campylobacter jejuni strain Z1323CCJ0040]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=868434 WHP32_RS05625 WP_002875425.1 1083765..1084724(+) (waaF) [Campylobacter jejuni strain Z1323CCJ0040]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q0P9A8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1