Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RAB71_RS15425 Genome accession   NZ_CP132343
Coordinates   3665423..3665824 (-) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas sacchari strain CFBP4641     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3660423..3670824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RAB71_RS15410 (RAB71_15405) - 3662434..3664470 (-) 2037 WP_010343239.1 methyl-accepting chemotaxis protein -
  RAB71_RS15415 (RAB71_15410) - 3664511..3665041 (-) 531 WP_010343241.1 chemotaxis protein CheW -
  RAB71_RS15420 (RAB71_15415) - 3665043..3665405 (-) 363 WP_010343242.1 PleD family two-component system response regulator -
  RAB71_RS15425 (RAB71_15420) pilG 3665423..3665824 (-) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  RAB71_RS15430 (RAB71_15425) gshB 3666067..3667017 (+) 951 WP_010343243.1 glutathione synthase -
  RAB71_RS15435 (RAB71_15430) - 3667014..3667895 (+) 882 WP_010343244.1 energy transducer TonB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=868297 RAB71_RS15425 WP_003472648.1 3665423..3665824(-) (pilG) [Xanthomonas sacchari strain CFBP4641]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=868297 RAB71_RS15425 WP_003472648.1 3665423..3665824(-) (pilG) [Xanthomonas sacchari strain CFBP4641]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGCTTGCGGGTGATGGTGATCGACGATTCGAAAACAATCCGTCG
TACCGCCGAAACGTTGCTGAAGCGCGAAGGGTGCGAAGTGGTGACGGCGACCGACGGCTTCGAGGCCCTGGCCAAGATCG
CCGATCAGCAGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCCACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGGTCCGAGCAGTACCTCACCAAACCCTTTACACGCGAAGAGCTGCTGGGCGCGATCCGTACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677