Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RAB70_RS09610 Genome accession   NZ_CP132342
Coordinates   2282328..2282729 (+) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas sontii strain PPL1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2277328..2287729
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RAB70_RS09600 (RAB70_09595) - 2280257..2281138 (-) 882 WP_148829656.1 energy transducer TonB -
  RAB70_RS09605 (RAB70_09600) gshB 2281135..2282085 (-) 951 WP_017910262.1 glutathione synthase -
  RAB70_RS09610 (RAB70_09605) pilG 2282328..2282729 (+) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  RAB70_RS09615 (RAB70_09610) - 2282747..2283109 (+) 363 WP_026143267.1 PleD family two-component system response regulator -
  RAB70_RS09620 (RAB70_09615) - 2283111..2283641 (+) 531 WP_017910264.1 chemotaxis protein CheW -
  RAB70_RS09625 (RAB70_09620) - 2283682..2285718 (+) 2037 WP_017910265.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=868278 RAB70_RS09610 WP_003472648.1 2282328..2282729(+) (pilG) [Xanthomonas sontii strain PPL1]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=868278 RAB70_RS09610 WP_003472648.1 2282328..2282729(+) (pilG) [Xanthomonas sontii strain PPL1]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGCTTGCGGGTCATGGTGATCGACGATTCGAAAACGATCCGTCG
CACTGCCGAAACGTTGCTGAAGCGCGAAGGGTGCGAAGTGGTGACGGCGACCGACGGCTTCGAGGCGCTGGCCAAGATCG
CCGACCAGCAGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCCACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGGTCCGAGCAGTACCTCACCAAACCCTTTACACGCGAAGAGCTGCTGGGCGCGATCCGTACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677