Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | K6K01_RS01980 | Genome accession | NZ_AP024622 |
| Coordinates | 371741..372190 (-) | Length | 149 a.a. |
| NCBI ID | WP_003246436.1 | Uniprot ID | A0AAE2SFQ0 |
| Organism | Bacillus subtilis strain BEST3096 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 366741..377190
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6K01_RS01945 (BsBEST3096_03360) | yckA | 366892..367572 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| K6K01_RS01950 (BsBEST3096_03370) | yckB | 367582..368445 (-) | 864 | WP_009966510.1 | transporter substrate-binding domain-containing protein | - |
| K6K01_RS01955 | - | 368607..368804 (+) | 198 | WP_119122841.1 | hypothetical protein | - |
| K6K01_RS01960 (BsBEST3096_03390) | yckC | 368823..369278 (+) | 456 | WP_003246356.1 | RDD family protein | - |
| K6K01_RS01965 (BsBEST3096_03400) | yckD | 369360..369692 (+) | 333 | WP_003246247.1 | YckD family protein | - |
| K6K01_RS01970 (BsBEST3096_03410) | bglC | 369846..371279 (+) | 1434 | WP_003246242.1 | 6-phospho-beta-glucosidase | - |
| K6K01_RS01975 (BsBEST3096_03420) | nin/comJ | 371316..371714 (-) | 399 | WP_003246342.1 | DNA-entry nuclease inhibitor | Regulator |
| K6K01_RS01980 (BsBEST3096_03430) | nucA/comI | 371741..372190 (-) | 450 | WP_003246436.1 | DNA-entry nuclease | Machinery gene |
| K6K01_RS01985 (BsBEST3096_03440) | tlpC | 372358..374079 (-) | 1722 | WP_003246498.1 | methyl-accepting chemotaxis protein TlpC | - |
| K6K01_RS01990 (BsBEST3096_03450) | hxlB | 374190..374747 (-) | 558 | WP_003246343.1 | 6-phospho-3-hexuloisomerase | - |
| K6K01_RS01995 (BsBEST3096_03460) | hxlA | 374753..375385 (-) | 633 | WP_003246452.1 | 3-hexulose-6-phosphate synthase | - |
| K6K01_RS02000 (BsBEST3096_03470) | hxlR | 375618..375980 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16486.48 Da Isoelectric Point: 4.6274
>NTDB_id=86825 K6K01_RS01980 WP_003246436.1 371741..372190(-) (nucA/comI) [Bacillus subtilis strain BEST3096]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=86825 K6K01_RS01980 WP_003246436.1 371741..372190(-) (nucA/comI) [Bacillus subtilis strain BEST3096]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |