Detailed information NTG0086825

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABJ73_RS00605
• Genome accession: NZ_AP027520
• Coordinates: 122347..123372 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain LR-31
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 117347..128372

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ73_RS00575 (VEE27_01100)	zapB	117431..117676 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AABJ73_RS00580 (VEE27_01110)	rraA	117761..118246 (-)	486	WP_264118634.1	ribonuclease E activity regulator RraA	-
AABJ73_RS00585 (VEE27_01120)	menA	118339..119265 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABJ73_RS00590 (VEE27_01130)	hslU	119332..120663 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABJ73_RS00595 (VEE27_01140)	hslV	120673..121203 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABJ73_RS00600 (VEE27_01150)	ftsN	121296..122255 (-)	960	WP_000068828.1	cell division protein FtsN	-
AABJ73_RS00605 (VEE27_01160)	cytR	122347..123372 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABJ73_RS00610 (VEE27_01170)	priA	123528..125726 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
AABJ73_RS00615 (VEE27_01180)	rpmE	125929..126141 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AABJ73_RS00620 (VEE27_01190)	-	126196..126819 (-)	624	WP_000720774.1	TIGR02117 family protein	-
AABJ73_RS00625 (VEE27_01200)	yiiX	126826..127434 (-)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
AABJ73_RS00630 (VEE27_01210)	metJ	127618..127935 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=86825 AABJ73_RS00605 WP_000644904.1 122347..123372(-) (cytR) [Escherichia coli strain LR-31]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=86825 AABJ73_RS00605 WP_000644904.1 122347..123372(-) (cytR) [Escherichia coli strain LR-31]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628