Detailed information NTG0868112

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHP59_RS06420
• Genome accession: NZ_CP148219
• Coordinates: 1249355..1250314 (+)
• Length: 319 a.a.
• NCBI ID: WP_070309048.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain Z1323CCJ0054
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1244355..1255314

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHP59_RS06395 (WHP59_06395)	-	1244915..1246114 (-)	1200	WP_032591570.1	glycosyltransferase family 8 protein	-
WHP59_RS06400 (WHP59_06400)	-	1246107..1247258 (-)	1152	WP_032591573.1	glycosyltransferase family 8 protein	-
WHP59_RS06405 (WHP59_06405)	-	1247271..1247813 (-)	543	WP_338878155.1	FkbM family methyltransferase	-
WHP59_RS06410 (WHP59_06410)	-	1247807..1248418 (-)	612	WP_338878101.1	hypothetical protein	-
WHP59_RS06415 (WHP59_06415)	waaV	1248481..1249296 (-)	816	WP_060806422.1	glycosyltransferase family 2 protein	-
WHP59_RS06420 (WHP59_06420)	waaF	1249355..1250314 (+)	960	WP_070309048.1	lipopolysaccharide heptosyltransferase II	Regulator
WHP59_RS06425 (WHP59_06425)	gmhA	1250295..1250855 (-)	561	WP_020247045.1	D-sedoheptulose 7-phosphate isomerase	-
WHP59_RS06430 (WHP59_06430)	rfaE1	1250852..1252237 (-)	1386	WP_060806424.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHP59_RS06435 (WHP59_06435)	rfaD	1252230..1253183 (-)	954	WP_002859254.1	ADP-glyceromanno-heptose 6-epimerase	-
WHP59_RS06440 (WHP59_06440)	gmhB	1253184..1253745 (-)	562	Protein_1250	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHP59_RS06445 (WHP59_06445)	-	1253826..1254128 (+)	303	WP_002852762.1	cytochrome c	-
WHP59_RS06450 (WHP59_06450)	ccoS	1254151..1254357 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36789.44 Da
• Isoelectric Point: 10.4034

>NTDB_id=868112 WHP59_RS06420 WP_070309048.1 1249355..1250314(+) (waaF) [Campylobacter jejuni strain Z1323CCJ0054]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQVLSLRKKLGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLHIKAHLKDLKLPFKLKFQSLLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCDEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GSMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=868112 WHP59_RS06420 WP_070309048.1 1249355..1250314(+) (waaF) [Campylobacter jejuni strain Z1323CCJ0054]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTACAAACAAGTCCTATCTTTACGCAAAAAACTTGGCAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTCACATAAAAGCTCACCTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAGCCTTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGTCAAAGTCATGAAATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTCTGCGATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAACCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGTGATCTTTTCATCACAAATGACAGT
GGCTCTATGCACATAAGTGCGGTTTACAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACCTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	91.85	100	0.919