Detailed information NTG0868025

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHQ41_RS04280
• Genome accession: NZ_CP148215
• Coordinates: 810612..811562 (-)
• Length: 316 a.a.
• NCBI ID: WP_002867402.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain Z1323CCJ0058
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 805612..816562

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHQ41_RS04245 (WHQ41_04245)	ccoS	805800..806006 (+)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
WHQ41_RS04250 (WHQ41_04250)	-	806029..806331 (-)	303	WP_002852762.1	cytochrome c	-
WHQ41_RS04255 (WHQ41_04255)	gmhB	806412..806973 (+)	562	Protein_824	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHQ41_RS04260 (WHQ41_04260)	rfaD	806974..807927 (+)	954	WP_234728994.1	ADP-glyceromanno-heptose 6-epimerase	-
WHQ41_RS04265 (WHQ41_04265)	rfaE1	807920..809305 (+)	1386	WP_002867399.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHQ41_RS04270 (WHQ41_04270)	gmhA	809302..809862 (+)	561	WP_002867400.1	D-sedoheptulose 7-phosphate isomerase	-
WHQ41_RS04275 (WHQ41_04275)	-	809862..810626 (+)	765	WP_002867401.1	glycosyltransferase family 25 protein	-
WHQ41_RS04280 (WHQ41_04280)	waaF	810612..811562 (-)	951	WP_002867402.1	lipopolysaccharide heptosyltransferase II	Regulator
WHQ41_RS04285 (WHQ41_04285)	-	811621..812442 (+)	822	WP_002867403.1	glycosyltransferase family 2 protein	-
WHQ41_RS04290 (WHQ41_04290)	-	812513..813469 (+)	957	WP_002867404.1	UDP-glucuronic acid decarboxylase family protein	-
WHQ41_RS04295 (WHQ41_04295)	-	813475..814776 (+)	1302	WP_338851171.1	UDP-glucose/GDP-mannose dehydrogenase family protein	-
WHQ41_RS04300 (WHQ41_04300)	galE	814773..815747 (+)	975	WP_146263329.1	UDP-glucose 4-epimerase GalE	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36324.91 Da
• Isoelectric Point: 10.3207

>NTDB_id=868025 WHQ41_RS04280 WP_002867402.1 810612..811562(-) (waaF) [Campylobacter jejuni strain Z1323CCJ0058]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFKSPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=868025 WHQ41_RS04280 WP_002867402.1 810612..811562(-) (waaF) [Campylobacter jejuni strain Z1323CCJ0058]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTAAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACTATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCTGAAGTGATTTTAAAGGCAATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.652	99.051	0.918