Detailed information NTG0867989

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHP61_RS08645
• Genome accession: NZ_CP148214
• Coordinates: 1620846..1621796 (+)
• Length: 316 a.a.
• NCBI ID: WP_002872238.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain Z1323CCJ0059
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1615846..1626796

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHP61_RS08625 (WHP61_08625)	galE	1616663..1617637 (-)	975	WP_100609522.1	UDP-glucose 4-epimerase GalE	-
WHP61_RS08630 (WHP61_08630)	-	1617634..1618933 (-)	1300	Protein_1670	UDP-glucose/GDP-mannose dehydrogenase family protein	-
WHP61_RS08635 (WHP61_08635)	-	1618939..1619895 (-)	957	WP_002873538.1	UDP-glucuronic acid decarboxylase family protein	-
WHP61_RS08640 (WHP61_08640)	-	1619966..1620787 (-)	822	WP_002873537.1	glycosyltransferase family 2 protein	-
WHP61_RS08645 (WHP61_08645)	waaF	1620846..1621796 (+)	951	WP_002872238.1	lipopolysaccharide heptosyltransferase II	Regulator
WHP61_RS08650 (WHP61_08650)	-	1621782..1622546 (-)	765	WP_002872239.1	glycosyltransferase family 25 protein	-
WHP61_RS08655 (WHP61_08655)	gmhA	1622546..1623106 (-)	561	WP_002842583.1	D-sedoheptulose 7-phosphate isomerase	-
WHP61_RS08660 (WHP61_08660)	rfaE1	1623103..1624488 (-)	1386	WP_070290007.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHP61_RS08665 (WHP61_08665)	rfaD	1624481..1625434 (-)	954	WP_002853798.1	ADP-glyceromanno-heptose 6-epimerase	-
WHP61_RS08670 (WHP61_08670)	gmhB	1625435..1625995 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHP61_RS08675 (WHP61_08675)	-	1626077..1626379 (+)	303	WP_002852762.1	cytochrome c	-
WHP61_RS08680 (WHP61_08680)	ccoS	1626402..1626608 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36305.91 Da
• Isoelectric Point: 10.3316

>NTDB_id=867989 WHP61_RS08645 WP_002872238.1 1620846..1621796(+) (waaF) [Campylobacter jejuni strain Z1323CCJ0059]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLGIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI

Nucleotide

• Length: 951 bp

>NTDB_id=867989 WHP61_RS08645 WP_002872238.1 1620846..1621796(+) (waaF) [Campylobacter jejuni strain Z1323CCJ0059]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGGCATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCACGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCTGAAGTGATTTTAAAGGCAATTCAAAATTTAATTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.994	99.367	0.924