Detailed information NTG0867743

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHP75_RS06080
• Genome accession: NZ_CP148203
• Coordinates: 1140740..1141690 (+)
• Length: 316 a.a.
• NCBI ID: WP_002872238.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain Z1323CCJ0069
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1135740..1146690

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHP75_RS06060 (WHP75_06060)	galE	1136558..1137532 (-)	975	WP_100609522.1	UDP-glucose 4-epimerase GalE	-
WHP75_RS06065 (WHP75_06065)	-	1137529..1138827 (-)	1299	WP_338877682.1	UDP-glucose/GDP-mannose dehydrogenase family protein	-
WHP75_RS06070 (WHP75_06070)	-	1138833..1139789 (-)	957	WP_002873538.1	UDP-glucuronic acid decarboxylase family protein	-
WHP75_RS06075 (WHP75_06075)	-	1139860..1140681 (-)	822	WP_002873537.1	glycosyltransferase family 2 protein	-
WHP75_RS06080 (WHP75_06080)	waaF	1140740..1141690 (+)	951	WP_002872238.1	lipopolysaccharide heptosyltransferase II	Regulator
WHP75_RS06085 (WHP75_06085)	-	1141676..1142440 (-)	765	WP_002872239.1	glycosyltransferase family 25 protein	-
WHP75_RS06090 (WHP75_06090)	gmhA	1142440..1143000 (-)	561	WP_002842583.1	D-sedoheptulose 7-phosphate isomerase	-
WHP75_RS06095 (WHP75_06095)	rfaE1	1142997..1144382 (-)	1386	WP_070290007.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHP75_RS06100 (WHP75_06100)	rfaD	1144375..1145328 (-)	954	WP_002853798.1	ADP-glyceromanno-heptose 6-epimerase	-
WHP75_RS06105 (WHP75_06105)	gmhB	1145329..1145889 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHP75_RS06110 (WHP75_06110)	-	1145971..1146273 (+)	303	WP_002852762.1	cytochrome c	-
WHP75_RS06115 (WHP75_06115)	ccoS	1146296..1146502 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36305.91 Da
• Isoelectric Point: 10.3316

>NTDB_id=867743 WHP75_RS06080 WP_002872238.1 1140740..1141690(+) (waaF) [Campylobacter jejuni strain Z1323CCJ0069]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLGIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI

Nucleotide

• Length: 951 bp

>NTDB_id=867743 WHP75_RS06080 WP_002872238.1 1140740..1141690(+) (waaF) [Campylobacter jejuni strain Z1323CCJ0069]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGGCATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCACGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCTGAAGTGATTTTAAAGGCAATTCAAAATTTAATTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.994	99.367	0.924