Detailed information NTG0867697

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHP66_RS05900
• Genome accession: NZ_CP148201
• Coordinates: 1120405..1121364 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: Q0P9A8
• Organism: Campylobacter jejuni strain Z1323CCJ0071
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1115405..1126364

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHP66_RS05875 (WHP66_05875)	neuC	1115965..1117080 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
WHP66_RS05880 (WHP66_05880)	-	1117077..1117991 (+)	915	Protein_1138	beta-1,4-N-acetylgalactosaminyltransferase	-
WHP66_RS05885 (WHP66_05885)	-	1118025..1118687 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
WHP66_RS05890 (WHP66_05890)	-	1118682..1119538 (-)	857	Protein_1140	glycosyltransferase	-
WHP66_RS05895 (WHP66_05895)	waaV	1119522..1120346 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
WHP66_RS05900 (WHP66_05900)	waaF	1120405..1121364 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
WHP66_RS05905 (WHP66_05905)	gmhA	1121345..1121905 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
WHP66_RS05910 (WHP66_05910)	rfaE1	1121902..1123287 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHP66_RS05915 (WHP66_05915)	rfaD	1123280..1124233 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
WHP66_RS05920 (WHP66_05920)	gmhB	1124234..1124794 (-)	561	WP_052782596.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHP66_RS05925 (WHP66_05925)	-	1124875..1125177 (+)	303	WP_002852762.1	cytochrome c	-
WHP66_RS05930 (WHP66_05930)	ccoS	1125200..1125406 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=867697 WHP66_RS05900 WP_002875425.1 1120405..1121364(+) (waaF) [Campylobacter jejuni strain Z1323CCJ0071]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=867697 WHP66_RS05900 WP_002875425.1 1120405..1121364(+) (waaF) [Campylobacter jejuni strain Z1323CCJ0071]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q0P9A8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1