Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   Q9G86_RS20730 Genome accession   NZ_CP132200
Coordinates   4133506..4134300 (-) Length   264 a.a.
NCBI ID   WP_011110369.1    Uniprot ID   A0A9Q5QPF5
Organism   Bacillus thuringiensis strain L1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4128506..4139300
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q9G86_RS20710 (Q9G86_20710) - 4129935..4130168 (+) 234 WP_001190211.1 DUF2627 domain-containing protein -
  Q9G86_RS20715 (Q9G86_20715) - 4130218..4130946 (-) 729 WP_000172580.1 glycerophosphodiester phosphodiesterase -
  Q9G86_RS20720 (Q9G86_20720) - 4130997..4131143 (+) 147 WP_001247671.1 YycC family protein -
  Q9G86_RS20725 (Q9G86_20725) - 4131321..4132847 (-) 1527 WP_090977093.1 glycosyltransferase family 39 protein -
  Q9G86_RS28945 - 4133054..4133166 (-) 113 Protein_4041 hypothetical protein -
  Q9G86_RS20730 (Q9G86_20730) spo0A 4133506..4134300 (-) 795 WP_011110369.1 sporulation transcription factor Spo0A Regulator
  Q9G86_RS20735 (Q9G86_20735) spoIVB 4134588..4135886 (-) 1299 WP_002000940.1 SpoIVB peptidase -
  Q9G86_RS20740 (Q9G86_20740) recN 4136005..4137744 (-) 1740 WP_000947734.1 DNA repair protein RecN Machinery gene
  Q9G86_RS20745 (Q9G86_20745) argR 4138009..4138458 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29415.18 Da        Isoelectric Point: 7.1175

>NTDB_id=867609 Q9G86_RS20730 WP_011110369.1 4133506..4134300(-) (spo0A) [Bacillus thuringiensis strain L1]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=867609 Q9G86_RS20730 WP_011110369.1 4133506..4134300(-) (spo0A) [Bacillus thuringiensis strain L1]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCTGTATTGGAAAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTCGGGCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAATGCTATGATTAAACGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAATTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAACGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACCACAGCAAGCCGTGTGGAGCGAGCAATTC
GTCACGCGATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818