Detailed information NTG0867589

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: Q9G86_RS05865
• Genome accession: NZ_CP132200
• Coordinates: 1140281..1142881 (+)
• Length: 866 a.a.
• NCBI ID: WP_000365410.1
• Uniprot ID: A0A9X9C9I9
• Organism: Bacillus thuringiensis strain L1
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1135281..1147881

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q9G86_RS05830 (Q9G86_05830)	prsA	1136044..1136901 (-)	858	WP_097987120.1	peptidylprolyl isomerase PrsA	-
Q9G86_RS05835 (Q9G86_05835)	-	1137030..1137161 (-)	132	WP_001120851.1	DUF3941 domain-containing protein	-
Q9G86_RS05840 (Q9G86_05840)	-	1137262..1138119 (+)	858	WP_305926042.1	YitT family protein	-
Q9G86_RS05845 (Q9G86_05845)	-	1138145..1138342 (-)	198	WP_000527408.1	DUF3813 domain-containing protein	-
Q9G86_RS05850 (Q9G86_05850)	-	1138343..1138483 (-)	141	WP_000516816.1	hypothetical protein	-
Q9G86_RS05855 (Q9G86_05855)	-	1138589..1139398 (-)	810	WP_001041231.1	Cof-type HAD-IIB family hydrolase	-
Q9G86_RS05860 (Q9G86_05860)	-	1139890..1140069 (+)	180	WP_016082481.1	YjzC family protein	-
Q9G86_RS05865 (Q9G86_05865)	clpC	1140281..1142881 (+)	2601	WP_000365410.1	ATP-dependent chaperone ClpB	Regulator
Q9G86_RS05870 (Q9G86_05870)	-	1142920..1143102 (-)	183	WP_001211116.1	YjzD family protein	-
Q9G86_RS05875 (Q9G86_05875)	-	1143259..1143993 (+)	735	WP_305926043.1	alpha/beta hydrolase	-
Q9G86_RS05880 (Q9G86_05880)	-	1144023..1144895 (+)	873	WP_000487723.1	NAD(P)-dependent oxidoreductase	-
Q9G86_RS05885 (Q9G86_05885)	comZ	1144950..1145126 (+)	177	WP_001986215.1	ComZ family protein	Regulator
Q9G86_RS05890 (Q9G86_05890)	fabH	1145517..1146449 (+)	933	WP_001100533.1	beta-ketoacyl-ACP synthase III	-
Q9G86_RS05895 (Q9G86_05895)	fabF	1146481..1147719 (+)	1239	WP_000412656.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97410.40 Da
• Isoelectric Point: 5.1572

>NTDB_id=867589 Q9G86_RS05865 WP_000365410.1 1140281..1142881(+) (clpC) [Bacillus thuringiensis strain L1]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEALKQSAESLIKKKPSVTGSGAE
VGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLLAFSEEKGDINQLFARLHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLEGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT
VELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=867589 Q9G86_RS05865 WP_000365410.1 1140281..1142881(+) (clpC) [Bacillus thuringiensis strain L1]
ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCACCA
AGAGGTGGATACTGTTCATCTATTACTTGCATTATTAGAAGAGCAAGATGGATTAGCAGTACGTATATTTCAAAAAATGA
ATGTTGATATAGAAGCATTAAAGCAAAGCGCTGAAAGCTTAATTAAAAAGAAACCTTCTGTAACAGGGAGCGGTGCAGAG
GTTGGAAAATTGTATGTAACGAGCGCTCTGCAACAATTGCTTGTAAGAGCAGGGAAAGAAGCAGAAAAACTACAGGATGA
TTACATTTCAGTCGAACATGTATTGCTTGCTTTTTCCGAAGAAAAAGGCGATATAAATCAATTATTTGCAAGATTGCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGCCGTGATTTAGTGGCAGAAGTGAGAGCCGGGAAAATTGATCCTGTTATCGGCCGAGA
TAGTGAAATTCGACGCGTTATCCGCATTCTTTCACGTAAAACGAAAAACAATCCAGTTTTAATTGGTGAGCCAGGTGTTG
GTAAAACAGCAATCGTTGAAGGATTAGCACAGCGTATTGTGAAAAAGGATGTACCTGAAGGATTGAAAGATAGAACGATT
TTTGCATTAGATATGAGTGCGCTCGTAGCAGGTGCGAAATTCCGTGGTGAGTTCGAAGAGCGTCTGCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGCCGCATTTTATTATTCATTGATGAACTTCATACAATCGTTGGAGCTGGTAAAACAGAAG
GTGCGATGGATGCAGGAAATATGTTAAAACCGATGCTTGCTCGTGGTGAACTGCATTGTATCGGGGCGACAACATTAGAT
GAATATCGTAAATATATTGAAAAAGATCCAGCACTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA
AGATACGATTTCCATATTACGTGGATTAAAAGAACGCTTTGAAATTTATCACGGTGTAAATATTCATGACCGTGCGATTG
TAGCAGCGTCAGTTTTATCAGATCGATATATTTCAGATCGCTTCTTACCGGATAAAGCGATTGACCTTGTTGATGAAGCG
TGCGCAACAATTCGTACAGAAATCGATTCTATGCCGACAGAATTAGATGAAGTAACGCGTCGTATTATGCAGTTGGAAAT
TGAAGAAGCGGCTCTTGGAAAAGAAACGGATCGTGGTAGCCAAGAGCGTCTAAAAACATTGCAACGTGAATTATCGGATT
TAAAAGAAGTTGCAAGTGGTATGAGAGCGAAATGGGAGAAAGAAAAAGAAGACATTCACAAAGTTCGTGACTTACGTGAA
CATTTAGAACGTCTGCGCCGTGAATTAGAGGAAGCAGAAGGTAATTACGATTTAAATAAAGCAGCCGAACTTCGTCACGG
GAAAATTCCTGCAATCGAAAAAGAATTAAAAGAAGCGGAAGAAATGGGCGCGCATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAAATTGCAGATATTGTTTCACGCTGGACTGGTATTCCTGTTGCTAAACTTGTTGAAGGC
GAGCGTGAGAAATTACTACGCTTAGAGCAAATCTTATCAGAGCGTGTCATCGGACAAGAGGAAGCAGTAAGCTTAGTATC
AGACGCGGTTCTTCGTGCGCGCGCTGGTATTAAAGACCCGAATCGTCCAATTGGTTCCTTCATTTTCTTAGGCCCTACGG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTAGCGCAGTCTTTATTCGATAGTGAAGAGCAAATGATTCGTATTGACATG
TCTGAGTATATGGAGAAACACGCTGTGTCACGCTTAATTGGTGCGCCTCCTGGATATGTAGGATATGAAGAGGGCGGTCA
ATTAACAGAAGCGGTAAGACGTAAACCGTATTCAGTTATTTTGTTAGACGAAATCGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGATGGACGCATTACAGATTCACAAGGAAGAACAGTAGACTTTAAAAACACAGTTATT
ATTATGACTTCAAATATTGGATCTGCTCATTTACTAGAGGGATTAGAAGAAGATGGTTCGATCAAAGAGGAATCAAGAGA
CCTTGTAATGGGGCAATTAAGAGGACATTTCCGCCCTGAATTTTTAAACCGTGTTGATGAAATTATTTTATTCAAACCTC
TTACAACGAATGAAATTAAAGGCATTGTTGATAAAATTGTAAAAGAACTACAAGGCCGTCTAGCTGACCGTCACATTACA
GTAGAATTAACAGATGCAGCAAAAGAATTTGTTGTAGAAGCTGGTTTCGATCCAATGTACGGAGCTCGTCCATTAAAACG
ATACGTACAACGTCAAGTGGAAACGAAATTAGCAAGAGAATTAATTGCAGGAACAATTACAGACAATAGTCACGTAGTTG
TTGATGTAGAAAATAACGAATTAGTCGTTCATGTGAAATGA

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• AAA lid domain (AAA_lid_9) (345-447)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.886	100	0.484
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	41.648	100	0.42
clpC	Lactococcus lactis subsp. cremoris KW2	47.339	82.448	0.39