Detailed information NTG0867515

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: Q9L40_RS12785
• Genome accession: NZ_CP132190
• Coordinates: 1656290..1657297 (+)
• Length: 335 a.a.
• NCBI ID: WP_029627696.1
• Uniprot ID: A0AAX1QU39
• Organism: Vibrio cholerae strain DRC187
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1651290..1662297

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q9L40_RS12765 (Q9L40_12765)	metJ	1651294..1651611 (+)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-
Q9L40_RS12770 (Q9L40_12770)	-	1651722..1652999 (-)	1278	WP_029627698.1	malic enzyme-like NAD(P)-binding protein	-
Q9L40_RS12775 (Q9L40_12775)	rpmE	1653307..1653525 (-)	219	WP_000643446.1	50S ribosomal protein L31	-
Q9L40_RS12780 (Q9L40_12780)	priA	1653780..1655984 (+)	2205	WP_305798971.1	primosomal protein N'	-
Q9L40_RS12785 (Q9L40_12785)	cytR	1656290..1657297 (+)	1008	WP_029627696.1	DNA-binding transcriptional regulator CytR	Regulator
Q9L40_RS12790 (Q9L40_12790)	-	1657469..1658020 (+)	552	WP_113601289.1	SPOR domain-containing protein	-
Q9L40_RS12795 (Q9L40_12795)	hslV	1658157..1658714 (+)	558	WP_001960141.1	ATP-dependent protease subunit HslV	-
Q9L40_RS12800 (Q9L40_12800)	hslU	1658780..1660111 (+)	1332	WP_305798970.1	HslU--HslV peptidase ATPase subunit	-
Q9L40_RS12805 (Q9L40_12805)	-	1660215..1661132 (+)	918	WP_071169458.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
Q9L40_RS12810 (Q9L40_12810)	rraA	1661207..1661722 (+)	516	WP_029627692.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37032.62 Da
• Isoelectric Point: 7.0759

>NTDB_id=867515 Q9L40_RS12785 WP_029627696.1 1656290..1657297(+) (cytR) [Vibrio cholerae strain DRC187]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVLRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=867515 Q9L40_RS12785 WP_029627696.1 1656290..1657297(+) (cytR) [Vibrio cholerae strain DRC187]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACTGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCATCGACTCGTAAACGAGTCGAGGAGGCCGTGCTGGAAGCGGGTTACTCACCAAATTCTTTAGCGCGCAATT
TGCGGCGTAATGAATCCAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGC
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCAGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCCGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGCTGCGTCGTGCTGGTATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACGTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGCCATAACGATACGATGGCGATTGGCGCGATTCAGGAAGCGAAGCGATTGGGTTTGCGTGTACCGCAAGATCT
CTCCGTGGTCGGTTTTGACGATATTCAATTCGCTCAGTATTGCGATCCTCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGGCGTCAAGCCATGCTGATGATGCTTGAGCTGCTTCGCGGACACGATGTGCGTGCTGGCTCGCGTCTCTTGGAG
ACCAAATTGGTATTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	99.701	100	0.997
cytR	Vibrio parahaemolyticus RIMD 2210633	90.419	99.701	0.901