Detailed information NTG0867498

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: Q9L40_RS09035
• Genome accession: NZ_CP132190
• Coordinates: 855784..859317 (+)
• Length: 1177 a.a.
• NCBI ID: WP_181711630.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain DRC187
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 850784..864317

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q9L40_RS09015 (Q9L40_09015)	erpA	851363..851704 (-)	342	WP_000005743.1	iron-sulfur cluster insertion protein ErpA	-
Q9L40_RS09020 (Q9L40_09020)	hemL	851988..853286 (+)	1299	WP_000167257.1	glutamate-1-semialdehyde 2,1-aminomutase	-
Q9L40_RS09025 (Q9L40_09025)	-	853540..854625 (+)	1086	WP_001290819.1	AI-2E family transporter	-
Q9L40_RS09030 (Q9L40_09030)	rsmC	854698..855720 (+)	1023	WP_001183370.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
Q9L40_RS09035 (Q9L40_09035)	chiS	855784..859317 (+)	3534	WP_181711630.1	two-component system sensor histidine kinase ChiS	Regulator
Q9L40_RS09040 (Q9L40_09040)	-	860176..861846 (+)	1671	WP_029627930.1	ABC transporter substrate-binding protein	-
Q9L40_RS09045 (Q9L40_09045)	-	862016..863002 (+)	987	WP_000540336.1	ABC transporter permease	-
Q9L40_RS09050 (Q9L40_09050)	-	863005..864030 (+)	1026	WP_000646275.1	ABC transporter permease	-

Sequence

Protein

• Length: 1177 a.a.
• Molecular weight: 133289.50 Da
• Isoelectric Point: 6.9113

>NTDB_id=867498 Q9L40_RS09035 WP_181711630.1 855784..859317(+) (chiS) [Vibrio cholerae strain DRC187]
MRLCPRFSLDLLVKVKKLVNFVTLGFPCLSPTHAWRSPQSFTESNTLIMFRFYRKQKFKRLQNTLMAAFLALSIIPLTIT
ALFFLHSHSKDLEQQSTSYLVSVRDNKQQQVIDYMMAKESEVMGFVRSELAYASGGRFYGLVNAFQRLDVSIEAAREHAQ
QRYIAGSGDQIKTSILPQSSSYVGSERYRLLHKRYHWAYLELLKRSDFDDILLVDIDGNVVYSIYKYDNFGTNLLTGKYQ
DSNLGHTFKRLEHTVNEQRKNNEDFTPVVISDFVQENGKQYAWLGAPIIQQGYLHSYAMFRLPSNAITKLIAEGSSYPSM
QTILVGQDHRSRTLTSAEIAVEKSKEVVDLALSGKRAVGTYTNTDGEQIIAAYAPINLKNIHWALVVELPEKEAFARVRQ
LEKLFVFAMLTAIVLVVIASHYLSNFITSPLLKLTWAAERVSAGDLDEAMINTERKDEIGRLAVSFERMQRSIREKISLI
KSQNKELESNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAEALISGANGPISAAHKYQLDIIISSGQRLA
TLVDDLLDYHKMRYGALDIQRCAVDLSSATRLVLELSHHLLGKKTLRIINQVSEQPVWVSADPQRLEQVLYNLIGNAIKY
TSEGKIVISATYIDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGHDSSRYRQGAGLGLSISRQLIELMHGTLYVSSQPMV
GTTFSFTLPLASEEEIAQARLTELPHFQAPEVLDTELPEQSTLPENEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQ
DGHQVLEAIKREKPELVLLDIMMPGMSGYQVCEKLRQTYDHAELPIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELA
ARIVAHLTASKAELRRIENAQLQKELKHRAMVEASLLETQGRLLEQLESAPEAILCVKEGNKVRFANEAAARLFRRTPEQ
LKRSNAEELIAPKFLNIEQEHYCGNIDVYVDDVRQHLSADVLRLPQGSGLQAMYIFNVGGSINAARIHNLETAVEALSSY
AFEGDKDKLQKLKELGGEFTRIADKASGEYQSKQDLMRAVLVEAMTSALNYWERVSGQSKFTFAEQSGLWRVYLDRSTLQ
TRTLDKYLRIETLPKTPRWRTVLNSLDYILEHCKESGPERTHIEMQRDKLQKLLTSE

Nucleotide

• Length: 3534 bp

>NTDB_id=867498 Q9L40_RS09035 WP_181711630.1 855784..859317(+) (chiS) [Vibrio cholerae strain DRC187]
TTGCGTCTATGCCCACGCTTTAGCTTGGACTTACTTGTCAAAGTAAAAAAACTCGTTAATTTCGTTACTTTAGGTTTTCC
TTGTCTATCACCCACTCATGCTTGGCGATCGCCGCAGAGTTTCACCGAAAGTAACACCTTAATTATGTTTAGGTTCTATC
GAAAACAAAAATTCAAACGCCTGCAAAATACCTTGATGGCCGCATTTTTGGCCCTCAGCATTATTCCGTTGACAATTACT
GCGTTGTTTTTCCTACATTCACACAGTAAAGATCTGGAGCAACAGAGCACATCTTACTTGGTTTCAGTTCGGGATAATAA
ACAGCAACAGGTCATCGACTACATGATGGCCAAAGAGTCGGAAGTGATGGGCTTTGTCCGCTCCGAATTAGCTTATGCCA
GTGGCGGACGTTTTTATGGTCTGGTCAATGCTTTTCAGCGCTTAGACGTCAGTATTGAAGCGGCTCGTGAACATGCTCAG
CAACGCTATATTGCTGGCTCTGGTGACCAAATTAAAACATCAATACTTCCTCAATCAAGCAGCTATGTAGGCAGTGAGCG
CTACAGACTGCTGCATAAACGCTATCACTGGGCTTATTTAGAACTACTTAAACGGTCGGATTTTGATGACATCTTATTAG
TCGATATTGATGGCAACGTTGTTTATTCGATCTATAAATATGACAACTTTGGTACAAATTTATTAACGGGCAAATACCAA
GACTCCAATCTAGGCCATACCTTCAAACGTTTAGAACACACGGTCAATGAACAGCGCAAAAACAACGAAGATTTCACCCC
CGTCGTGATTTCTGATTTTGTGCAAGAGAATGGCAAACAATACGCTTGGCTTGGCGCACCGATTATTCAGCAAGGCTATT
TACATAGCTACGCCATGTTCCGTTTACCGAGCAATGCGATCACAAAACTTATCGCAGAAGGCAGTAGCTATCCTTCTATG
CAAACTATTTTAGTGGGGCAAGATCACCGCTCAAGAACCTTAACTTCCGCCGAAATTGCGGTTGAAAAAAGCAAAGAAGT
GGTCGATTTAGCCTTATCGGGTAAACGCGCCGTAGGCACTTACACCAATACCGATGGTGAACAGATCATCGCAGCCTACG
CACCGATCAATTTGAAAAATATTCATTGGGCTTTGGTAGTGGAACTGCCTGAGAAAGAAGCGTTTGCTCGCGTTCGTCAG
TTAGAAAAGCTGTTTGTTTTTGCGATGTTGACGGCCATTGTCTTAGTGGTCATCGCCTCGCATTACCTTTCCAATTTCAT
TACCTCACCGCTTTTGAAGCTGACATGGGCAGCCGAACGTGTTTCGGCAGGCGATCTTGATGAAGCCATGATCAATACCG
AACGCAAAGATGAAATTGGCCGCTTGGCGGTCAGTTTTGAGCGTATGCAGCGTTCCATTCGCGAAAAAATATCGCTGATC
AAATCGCAAAATAAAGAGTTAGAGAGCAATTTACTGATCATTCGTAAGCAAAACGATGAGTTACAACTAGCAAATAAGCT
AAAAGATGAGTTCCTCGCGACCACATCACATGAATTACGTACCCCATTACATGGCATGATTGGCATTGCCGAAGCTCTAA
TCTCGGGGGCAAATGGCCCTATTTCAGCGGCGCACAAGTATCAACTCGACATCATTATCAGCAGTGGGCAGCGTTTGGCG
ACTCTGGTTGATGACCTACTCGATTACCACAAAATGCGCTATGGCGCGCTGGATATTCAAAGGTGTGCCGTCGATTTATC
GAGCGCCACGCGCTTGGTCTTGGAGCTTTCTCACCATTTACTTGGCAAGAAAACGCTGCGCATTATTAATCAAGTCTCAG
AGCAACCGGTTTGGGTTTCAGCAGATCCTCAACGCTTAGAGCAAGTCCTGTATAACTTGATCGGCAATGCCATTAAGTAC
ACTTCTGAAGGCAAAATTGTTATCTCCGCAACCTATATTGACGATAAAGTGCGTGTGCAGGTAGTGGACACGGGTCAAGG
CATTCCAGCAGAACAGCTAGAGCACATCTTTGAGCCATTGATCCAAGCGGGTCATGATTCGAGTCGCTATCGCCAAGGCG
CAGGACTCGGGCTTTCCATCAGTCGCCAGTTAATCGAATTGATGCACGGCACTCTCTACGTAAGTAGTCAGCCGATGGTT
GGCACTACCTTTAGCTTCACGCTGCCTCTGGCGAGCGAAGAAGAGATTGCTCAAGCGCGCTTGACCGAGCTCCCCCACTT
CCAAGCACCGGAAGTGTTAGATACTGAACTGCCCGAGCAAAGCACCTTACCTGAAAATGAACATGGCCCACTTCTGTTGG
TCGCCGATGATGAGCCTGTCAACTTGCGTGTGCTGGACAGCTTTTTACGTCTTGAAGGTTATCGCGTGCATACCGCGCAA
GATGGCCATCAAGTACTTGAAGCAATTAAACGTGAAAAACCTGAATTGGTGTTACTCGACATCATGATGCCAGGCATGAG
CGGTTATCAAGTGTGTGAAAAACTTCGACAAACTTACGACCACGCTGAACTACCTATTATTATGCTGACGGCTCTCAACC
AGTCTGATGACCGAGTACGAGGGTTTGAAGCTGGAGCCAATGACTACTTATCCAAACCATTCAACAAACAAGAGCTGGCC
GCGCGCATTGTCGCTCACCTCACGGCGAGCAAAGCCGAACTGCGCCGCATTGAGAATGCCCAACTGCAAAAAGAGTTGAA
ACATCGCGCTATGGTAGAAGCGAGCCTATTGGAAACCCAAGGCCGATTATTGGAACAGTTAGAATCTGCGCCAGAAGCGA
TTTTGTGCGTTAAAGAGGGCAATAAAGTACGTTTTGCTAACGAAGCGGCAGCACGTTTATTTAGACGCACCCCTGAGCAG
CTCAAACGCTCCAATGCCGAAGAACTGATTGCACCTAAATTCTTGAATATTGAACAAGAACATTACTGCGGCAATATTGA
TGTTTACGTTGATGATGTGCGCCAACACCTCTCTGCCGATGTCCTGCGCTTGCCACAAGGCTCTGGCTTACAAGCGATGT
ACATTTTTAATGTTGGCGGCAGCATCAATGCCGCGCGGATTCATAACCTAGAAACAGCGGTAGAAGCCCTGTCTAGCTAT
GCCTTCGAAGGCGATAAAGACAAGCTGCAAAAACTCAAGGAGCTGGGTGGCGAGTTTACTCGTATTGCTGATAAAGCCTC
TGGCGAGTATCAATCGAAACAAGATTTAATGCGCGCCGTGTTAGTCGAAGCCATGACCAGTGCCTTGAACTATTGGGAAC
GAGTCTCAGGACAAAGCAAGTTCACGTTTGCCGAACAAAGTGGCTTATGGCGTGTTTATCTTGACCGCAGCACACTACAA
ACTCGGACCCTAGACAAATACTTGCGGATTGAGACACTGCCTAAAACACCACGTTGGCGAACCGTACTGAACTCGCTCGA
TTACATTCTTGAGCATTGCAAAGAATCAGGCCCTGAGCGCACCCATATCGAAATGCAGCGCGACAAATTGCAAAAGCTCC
TGACCAGTGAGTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (622-731)

• Response regulator receiver domain (Response_reg) (773-883)

• PAS domain (PAS_8) (927-961)

• His Kinase A (phospho-acceptor) domain (HisKA) (508-573)

• HAMP domain (HAMP) (423-475)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	98.726	100	0.987