Detailed information NTG0867392

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: Q9L39_RS01370
• Genome accession: NZ_CP132182
• Coordinates: 284737..285744 (+)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: A0A085RG68
• Organism: Vibrio cholerae strain DRC072
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 279737..290744

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q9L39_RS01350 (Q9L39_01350)	metJ	279741..280058 (+)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-
Q9L39_RS01355 (Q9L39_01355)	-	280169..281446 (-)	1278	WP_001278588.1	malic enzyme-like NAD(P)-binding protein	-
Q9L39_RS01360 (Q9L39_01360)	rpmE	281754..281972 (-)	219	WP_000643446.1	50S ribosomal protein L31	-
Q9L39_RS01365 (Q9L39_01365)	priA	282227..284431 (+)	2205	WP_001247858.1	primosomal protein N'	-
Q9L39_RS01370 (Q9L39_01370)	cytR	284737..285744 (+)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
Q9L39_RS01375 (Q9L39_01375)	-	285916..286467 (+)	552	WP_001884022.1	SPOR domain-containing protein	-
Q9L39_RS01380 (Q9L39_01380)	hslV	286604..287161 (+)	558	WP_000208249.1	ATP-dependent protease subunit HslV	-
Q9L39_RS01385 (Q9L39_01385)	hslU	287227..288558 (+)	1332	WP_001293370.1	HslU--HslV peptidase ATPase subunit	-
Q9L39_RS01390 (Q9L39_01390)	-	288662..289579 (+)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
Q9L39_RS01395 (Q9L39_01395)	rraA	289654..290169 (+)	516	WP_000456236.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=867392 Q9L39_RS01370 WP_000224452.1 284737..285744(+) (cytR) [Vibrio cholerae strain DRC072]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=867392 Q9L39_RS01370 WP_000224452.1 284737..285744(+) (cytR) [Vibrio cholerae strain DRC072]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGTAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCAGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGTTGCGTCGTGCTGGCATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCATAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCTGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTTGAGCTGCTTCGCGGACACGATGTACGTGCTGGATCGCGTCTTTTGGAG
ACCAAGCTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A085RG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904