Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | K6J89_RS00245 | Genome accession | NZ_AP024621 |
| Coordinates | 44438..44728 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain BEST3095 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39438..49728
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J89_RS00205 (BsBEST3095_00290) | darA | 39461..39790 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| K6J89_RS00210 (BsBEST3095_00300) | yaaR | 39803..40243 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| K6J89_RS00215 (BsBEST3095_00310) | holB | 40255..41244 (+) | 990 | WP_003244417.1 | DNA polymerase III subunit delta' | - |
| K6J89_RS00220 (BsBEST3095_00320) | ricT | 41247..42074 (+) | 828 | WP_003243571.1 | competence/sporulation regulator complex protein RicT | - |
| K6J89_RS00225 (BsBEST3095_00330) | yabA | 42089..42448 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| K6J89_RS00230 (BsBEST3095_00340) | trmNF | 42507..43250 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| K6J89_RS00235 (BsBEST3095_00350) | yazA | 43237..43536 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| K6J89_RS00240 (BsBEST3095_00360) | rsmI | 43511..44389 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| K6J89_RS00245 (BsBEST3095_00370) | abrB | 44438..44728 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| K6J89_RS00250 (BsBEST3095_00380) | metG | 45223..47217 (+) | 1995 | WP_003226758.1 | methionine--tRNA ligase | - |
| K6J89_RS00255 (BsBEST3095_00390) | dayD | 47296..48063 (+) | 768 | WP_003226756.1 | TatD family hydrolase | - |
| K6J89_RS00260 (BsBEST3095_00400) | yabE | 48219..49532 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=86734 K6J89_RS00245 WP_003226760.1 44438..44728(-) (abrB) [Bacillus subtilis strain BEST3095]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=86734 K6J89_RS00245 WP_003226760.1 44438..44728(-) (abrB) [Bacillus subtilis strain BEST3095]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |