Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   EUCAG14_RS19540 Genome accession   NZ_CP132137
Coordinates   4137939..4139702 (+) Length   587 a.a.
NCBI ID   WP_148430189.1    Uniprot ID   A0A6N7WVF7
Organism   Eubacterium callanderi strain DSM 107592     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 4132939..4144702
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EUCAG14_RS19520 (EUCAG14_39310) - 4133101..4136478 (-) 3378 WP_148430194.1 hypothetical protein -
  EUCAG14_RS19525 (EUCAG14_39320) - 4136697..4136951 (-) 255 WP_148430193.1 hypothetical protein -
  EUCAG14_RS19530 (EUCAG14_39330) - 4137225..4137707 (+) 483 WP_148430191.1 MarR family winged helix-turn-helix transcriptional regulator -
  EUCAG14_RS19535 (EUCAG14_39340) - 4137700..4137873 (+) 174 WP_013382598.1 cysteine-rich KTR domain-containing protein -
  EUCAG14_RS19540 (EUCAG14_39350) rcrP 4137939..4139702 (+) 1764 WP_148430189.1 ABC transporter ATP-binding protein Regulator
  EUCAG14_RS19545 (EUCAG14_39360) rcrQ 4139695..4141530 (+) 1836 WP_013382600.1 ABC transporter ATP-binding protein Regulator
  EUCAG14_RS19550 (EUCAG14_39370) - 4141718..4143379 (-) 1662 WP_148430187.1 FAD-dependent oxidoreductase -
  EUCAG14_RS19555 (EUCAG14_39380) ahpC 4143396..4143962 (-) 567 WP_013382603.1 alkyl hydroperoxide reductase subunit C -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 64215.73 Da        Isoelectric Point: 8.5470

>NTDB_id=867226 EUCAG14_RS19540 WP_148430189.1 4137939..4139702(+) (rcrP) [Eubacterium callanderi strain DSM 107592]
MIKILKNLTTKEWGLVAIVLVLIVFQVWIDLTLPEFMGKITELVQTPGSGMQAILFAGIRMLLLTLASVAVSVVITGLAA
RIAANLSSRLRAGLFNKVQSFTMQEINNFSISSLITRTTNDITQVQMLMVIGLQILIKSPILALWAIVKIMGKSWQWSAA
TGIAVAILIIVSSIIISLAIPKFKLLQKQTDDLSRVSRENLTGLRVVRAYNAEQYQEDKFEKANSAFTHTNLFSNRLMAA
LMPSVELIMNGLTLSVYWIGAALIASSAVSERVPLFSDMMVFSSYAIQLLMAFMLLGVVLILIPRASVSADRICEVLDTN
PAIQDGIISHTRTATPGEVEFKNVSFKYPNAEDYVLQNISFRASKGETIAFIGSTGCGKSTVINLIPRFYDVTEGGVYVD
GINVKDFTQAALRNKIGYVSQKAILFKGDISSNVSFGSNGNGGVSHEAVTSAISTAQSTDFVEAMEDSYQSYVAPGGTNL
SGGQKQRLSIARAIARKPEILIFDDSFSALDYKTDKLLRGELRHHATDATIIIVAQRIGTIKDADKIIVLDEGRIAGMGT
HRELIKKCDLYKEIAYSQLSKEELENE

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=867226 EUCAG14_RS19540 WP_148430189.1 4137939..4139702(+) (rcrP) [Eubacterium callanderi strain DSM 107592]
TTGATAAAAATACTAAAAAATCTTACCACAAAAGAGTGGGGGCTGGTTGCCATCGTTCTTGTCCTGATTGTTTTTCAAGT
ATGGATTGATTTAACATTACCGGAATTTATGGGGAAAATCACCGAACTTGTTCAGACGCCCGGCAGCGGAATGCAGGCGA
TTTTATTCGCCGGCATCCGGATGCTGCTGCTCACCCTGGCAAGCGTTGCGGTTTCCGTTGTTATCACCGGGCTCGCCGCG
CGAATCGCAGCCAATCTTTCTTCAAGATTGAGAGCAGGCCTGTTTAATAAGGTACAGTCGTTCACAATGCAGGAAATTAA
TAATTTTTCCATTTCCAGTTTAATTACACGAACGACAAACGACATTACACAGGTTCAAATGCTGATGGTAATCGGGCTGC
AAATCCTGATTAAATCACCAATTTTAGCTCTATGGGCCATTGTAAAAATCATGGGCAAAAGCTGGCAGTGGTCAGCCGCG
ACAGGTATTGCAGTTGCGATACTGATTATTGTATCTTCAATAATCATTTCTCTGGCGATCCCAAAATTCAAACTGCTTCA
GAAGCAGACCGACGATTTGAGCCGTGTTTCAAGAGAAAACCTAACCGGCCTTCGGGTTGTCCGTGCCTACAACGCGGAGC
AGTATCAAGAAGATAAATTTGAAAAAGCCAATTCTGCTTTTACCCATACCAACTTATTTTCCAACCGACTAATGGCCGCA
CTGATGCCTTCTGTTGAGCTGATCATGAATGGTTTAACCTTATCGGTATACTGGATTGGCGCTGCGCTCATTGCATCCTC
CGCTGTGTCGGAAAGGGTTCCCTTGTTTTCAGACATGATGGTATTTTCCTCTTATGCCATTCAACTGCTCATGGCCTTCA
TGCTGCTTGGTGTTGTTTTAATCCTGATTCCCCGCGCCAGCGTATCCGCAGACCGCATTTGCGAAGTCCTAGATACCAAT
CCGGCCATTCAGGATGGAATCATCAGCCATACACGCACCGCTACGCCCGGCGAGGTAGAATTTAAAAACGTTAGCTTTAA
ATATCCAAACGCGGAGGATTATGTTCTGCAAAACATCAGCTTTCGGGCAAGCAAGGGCGAAACCATCGCCTTTATCGGCT
CCACAGGCTGTGGCAAGAGTACGGTTATCAACCTCATTCCAAGGTTTTATGATGTTACAGAAGGCGGCGTTTATGTGGAC
GGCATCAATGTCAAGGATTTTACCCAGGCGGCTTTGCGCAATAAAATCGGGTACGTTTCACAGAAGGCCATTCTTTTTAA
AGGGGATATTTCCTCCAATGTGTCCTTTGGTTCAAACGGAAACGGCGGGGTAAGCCATGAGGCCGTTACCTCTGCCATTT
CAACCGCCCAAAGCACAGACTTTGTGGAAGCCATGGAAGATTCCTATCAAAGCTATGTGGCGCCCGGCGGCACCAATCTT
TCCGGCGGACAAAAGCAGCGGCTTTCCATCGCCCGGGCCATTGCAAGAAAGCCCGAAATTTTGATATTTGACGATAGTTT
CTCAGCCCTTGACTATAAAACCGATAAGTTGCTGCGAGGCGAACTGAGACATCATGCCACAGACGCCACCATTATCATTG
TGGCTCAGCGCATCGGAACTATTAAGGATGCCGATAAAATTATTGTTTTAGATGAAGGCCGGATTGCCGGGATGGGCACA
CACCGCGAATTGATCAAAAAATGCGATTTATACAAAGAAATTGCCTATTCTCAACTCTCAAAGGAGGAACTGGAAAATGA
ATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(356-506)

ABC transporter transmembrane region (ABC_membrane)

(17-293)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7WVF7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

49.666

100

0.506