Detailed information
Bioinformatically predicted
Overview
| Name | scnR | Type | Regulator |
| Locus tag | EUCA11A_RS14165 | Genome accession | NZ_CP132136 |
| Coordinates | 2950204..2950899 (-) | Length | 231 a.a. |
| NCBI ID | WP_180493703.1 | Uniprot ID | A0A853JPM6 |
| Organism | Eubacterium callanderi strain DSM 2594 | ||
| Function | regulate comX expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2945204..2955899
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EUCA11A_RS14145 (EUCA11A_28140) | - | 2946808..2947857 (-) | 1050 | WP_216545800.1 | response regulator | - |
| EUCA11A_RS14155 (EUCA11A_28160) | - | 2948298..2948696 (+) | 399 | WP_208065751.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| EUCA11A_RS14160 (EUCA11A_28170) | - | 2948752..2950191 (-) | 1440 | WP_320074002.1 | HAMP domain-containing sensor histidine kinase | - |
| EUCA11A_RS14165 (EUCA11A_28180) | scnR | 2950204..2950899 (-) | 696 | WP_180493703.1 | response regulator transcription factor | Regulator |
| EUCA11A_RS14170 (EUCA11A_28190) | - | 2951053..2951961 (+) | 909 | WP_148430611.1 | ATP-binding cassette domain-containing protein | - |
| EUCA11A_RS14175 (EUCA11A_28200) | - | 2951961..2952710 (+) | 750 | WP_148430609.1 | ABC transporter permease | - |
| EUCA11A_RS14180 (EUCA11A_28210) | - | 2952723..2953457 (+) | 735 | WP_090412531.1 | ABC transporter permease | - |
| EUCA11A_RS14185 (EUCA11A_28220) | - | 2953572..2955056 (-) | 1485 | WP_013380617.1 | glycerol kinase GlpK | - |
Sequence
Protein
Download Length: 231 a.a. Molecular weight: 25719.90 Da Isoelectric Point: 4.8146
>NTDB_id=867206 EUCA11A_RS14165 WP_180493703.1 2950204..2950899(-) (scnR) [Eubacterium callanderi strain DSM 2594]
MDYIKDKGILLVDDEPELLKLVHKILENEGFAKVYTASSMAEGMTVFLEKAPDMAVLDVMLPDGEGFELLKFIRGSSDIP
VLFLSARGNADDRFTGFGLGADDYIIKPFLPQELVFRITAILKRAYKNEAPTFILADATVDLDRAEIIRGEEILPLTAKE
HAILQKLYENAGKIVTIGALCDFVWEGDSYGYEKPLMAHIGRIREKIETDPSHPKSLITVKGLGYKLLVSK
MDYIKDKGILLVDDEPELLKLVHKILENEGFAKVYTASSMAEGMTVFLEKAPDMAVLDVMLPDGEGFELLKFIRGSSDIP
VLFLSARGNADDRFTGFGLGADDYIIKPFLPQELVFRITAILKRAYKNEAPTFILADATVDLDRAEIIRGEEILPLTAKE
HAILQKLYENAGKIVTIGALCDFVWEGDSYGYEKPLMAHIGRIREKIETDPSHPKSLITVKGLGYKLLVSK
Nucleotide
Download Length: 696 bp
>NTDB_id=867206 EUCA11A_RS14165 WP_180493703.1 2950204..2950899(-) (scnR) [Eubacterium callanderi strain DSM 2594]
ATGGATTACATTAAAGATAAAGGCATTCTTCTGGTCGACGATGAACCAGAGCTTTTAAAGCTGGTGCATAAGATACTCGA
AAATGAAGGATTTGCGAAGGTTTATACAGCGTCGAGCATGGCCGAGGGAATGACCGTTTTTCTGGAAAAAGCTCCGGATA
TGGCCGTGCTTGATGTGATGTTGCCAGATGGTGAAGGTTTTGAGCTGCTAAAATTCATCCGTGGATCCTCGGATATCCCG
GTGCTTTTTTTATCAGCCAGAGGCAATGCCGACGACCGGTTCACCGGCTTTGGTCTGGGAGCGGATGATTATATTATCAA
GCCCTTTCTGCCCCAGGAGCTTGTGTTCAGGATCACAGCTATTTTAAAACGTGCCTACAAAAACGAAGCGCCGACCTTTA
TCCTGGCTGACGCCACAGTCGATCTGGACCGCGCTGAGATTATCAGGGGAGAGGAGATTCTTCCCCTTACGGCCAAAGAG
CATGCCATTCTTCAAAAGCTCTATGAAAATGCAGGGAAAATTGTAACCATTGGCGCCCTCTGTGATTTTGTATGGGAGGG
CGACAGCTATGGCTATGAAAAACCGCTCATGGCTCATATCGGGCGTATCCGGGAAAAAATCGAGACTGACCCCAGCCATC
CAAAGTCTCTTATTACAGTCAAAGGGCTTGGCTATAAGCTGCTCGTAAGTAAATAG
ATGGATTACATTAAAGATAAAGGCATTCTTCTGGTCGACGATGAACCAGAGCTTTTAAAGCTGGTGCATAAGATACTCGA
AAATGAAGGATTTGCGAAGGTTTATACAGCGTCGAGCATGGCCGAGGGAATGACCGTTTTTCTGGAAAAAGCTCCGGATA
TGGCCGTGCTTGATGTGATGTTGCCAGATGGTGAAGGTTTTGAGCTGCTAAAATTCATCCGTGGATCCTCGGATATCCCG
GTGCTTTTTTTATCAGCCAGAGGCAATGCCGACGACCGGTTCACCGGCTTTGGTCTGGGAGCGGATGATTATATTATCAA
GCCCTTTCTGCCCCAGGAGCTTGTGTTCAGGATCACAGCTATTTTAAAACGTGCCTACAAAAACGAAGCGCCGACCTTTA
TCCTGGCTGACGCCACAGTCGATCTGGACCGCGCTGAGATTATCAGGGGAGAGGAGATTCTTCCCCTTACGGCCAAAGAG
CATGCCATTCTTCAAAAGCTCTATGAAAATGCAGGGAAAATTGTAACCATTGGCGCCCTCTGTGATTTTGTATGGGAGGG
CGACAGCTATGGCTATGAAAAACCGCTCATGGCTCATATCGGGCGTATCCGGGAAAAAATCGAGACTGACCCCAGCCATC
CAAAGTCTCTTATTACAGTCAAAGGGCTTGGCTATAAGCTGCTCGTAAGTAAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| scnR | Streptococcus mutans UA159 |
50 |
99.567 |
0.498 |