Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   EUCA2A_RS00930 Genome accession   NZ_CP132135
Coordinates   214842..216605 (-) Length   587 a.a.
NCBI ID   WP_148430189.1    Uniprot ID   A0A6N7WVF7
Organism   Eubacterium callanderi strain DSM 2593     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 209842..221605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EUCA2A_RS00915 (EUCA2A_01840) ahpC 210577..211143 (+) 567 WP_013382603.1 alkyl hydroperoxide reductase subunit C -
  EUCA2A_RS00920 (EUCA2A_01850) - 211160..212827 (+) 1668 WP_320074659.1 FAD-dependent oxidoreductase -
  EUCA2A_RS00925 (EUCA2A_01860) rcrQ 213014..214849 (-) 1836 WP_207639413.1 ABC transporter ATP-binding protein Regulator
  EUCA2A_RS00930 (EUCA2A_01870) rcrP 214842..216605 (-) 1764 WP_148430189.1 ABC transporter ATP-binding protein Regulator
  EUCA2A_RS00935 (EUCA2A_01880) - 216671..216844 (-) 174 WP_013382598.1 cysteine-rich KTR domain-containing protein -
  EUCA2A_RS00940 (EUCA2A_01890) - 216837..217319 (-) 483 WP_320074660.1 MarR family winged helix-turn-helix transcriptional regulator -
  EUCA2A_RS00945 (EUCA2A_01900) - 217583..217837 (+) 255 WP_320074661.1 hypothetical protein -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 64215.73 Da        Isoelectric Point: 8.5470

>NTDB_id=867176 EUCA2A_RS00930 WP_148430189.1 214842..216605(-) (rcrP) [Eubacterium callanderi strain DSM 2593]
MIKILKNLTTKEWGLVAIVLVLIVFQVWIDLTLPEFMGKITELVQTPGSGMQAILFAGIRMLLLTLASVAVSVVITGLAA
RIAANLSSRLRAGLFNKVQSFTMQEINNFSISSLITRTTNDITQVQMLMVIGLQILIKSPILALWAIVKIMGKSWQWSAA
TGIAVAILIIVSSIIISLAIPKFKLLQKQTDDLSRVSRENLTGLRVVRAYNAEQYQEDKFEKANSAFTHTNLFSNRLMAA
LMPSVELIMNGLTLSVYWIGAALIASSAVSERVPLFSDMMVFSSYAIQLLMAFMLLGVVLILIPRASVSADRICEVLDTN
PAIQDGIISHTRTATPGEVEFKNVSFKYPNAEDYVLQNISFRASKGETIAFIGSTGCGKSTVINLIPRFYDVTEGGVYVD
GINVKDFTQAALRNKIGYVSQKAILFKGDISSNVSFGSNGNGGVSHEAVTSAISTAQSTDFVEAMEDSYQSYVAPGGTNL
SGGQKQRLSIARAIARKPEILIFDDSFSALDYKTDKLLRGELRHHATDATIIIVAQRIGTIKDADKIIVLDEGRIAGMGT
HRELIKKCDLYKEIAYSQLSKEELENE

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=867176 EUCA2A_RS00930 WP_148430189.1 214842..216605(-) (rcrP) [Eubacterium callanderi strain DSM 2593]
TTGATAAAAATACTAAAAAATCTTACCACAAAAGAGTGGGGGCTGGTTGCCATCGTTCTTGTCCTGATTGTTTTTCAAGT
ATGGATTGATTTAACATTACCGGAATTTATGGGAAAAATCACCGAACTTGTTCAGACGCCCGGCAGCGGAATGCAGGCGA
TTTTATTCGCCGGCATCCGGATGCTGCTGCTCACCCTGGCAAGCGTTGCGGTTTCCGTTGTTATCACCGGACTCGCCGCG
CGAATCGCAGCCAATCTTTCTTCAAGATTGAGAGCAGGCCTGTTTAATAAGGTACAGTCGTTCACAATGCAGGAAATTAA
TAATTTTTCCATTTCCAGTTTAATTACACGAACGACAAACGACATTACACAGGTTCAAATGCTGATGGTAATCGGGCTGC
AAATCCTGATTAAATCACCAATTTTAGCTCTATGGGCCATTGTAAAAATCATGGGCAAAAGCTGGCAGTGGTCAGCCGCG
ACAGGTATTGCAGTTGCGATACTGATTATTGTATCTTCAATAATCATTTCTCTGGCGATCCCAAAATTCAAACTGCTTCA
GAAGCAGACCGACGATTTGAGCCGTGTTTCAAGAGAAAACCTAACCGGCCTTCGGGTTGTCCGTGCCTACAACGCGGAGC
AGTATCAAGAAGATAAATTTGAAAAAGCCAATTCTGCTTTTACCCATACCAACTTATTTTCCAACCGACTAATGGCCGCA
CTGATGCCTTCAGTTGAGCTGATCATGAATGGTTTAACCTTATCGGTATACTGGATTGGCGCTGCGCTCATTGCATCCTC
CGCTGTGTCGGAAAGGGTTCCCTTGTTTTCAGACATGATGGTATTTTCCTCTTATGCCATTCAACTGCTCATGGCCTTCA
TGCTGCTTGGTGTTGTTTTAATCCTGATTCCCCGCGCCAGCGTATCCGCAGACCGCATTTGCGAAGTCCTAGATACCAAT
CCGGCCATTCAGGATGGAATCATCAGCCATACACGCACCGCTACGCCCGGCGAGGTAGAATTTAAAAACGTTAGCTTTAA
ATATCCAAACGCGGAGGATTATGTTCTGCAAAACATCAGCTTTCGGGCAAGCAAGGGCGAAACCATCGCCTTTATCGGCT
CCACAGGCTGTGGCAAGAGTACGGTTATCAACCTCATTCCAAGGTTTTATGATGTTACAGAAGGCGGCGTTTATGTGGAC
GGCATCAATGTCAAGGATTTTACCCAGGCGGCTTTGCGCAATAAAATCGGGTACGTTTCACAGAAGGCCATTCTTTTTAA
AGGGGATATTTCCTCCAATGTGTCCTTTGGTTCAAACGGAAACGGCGGGGTAAGTCATGAGGCCGTTACCTCTGCCATTT
CAACCGCCCAAAGCACAGACTTTGTGGAAGCCATGGAAGATTCCTATCAAAGCTATGTGGCGCCCGGCGGCACCAATCTT
TCCGGCGGACAAAAGCAGCGGCTTTCCATCGCCCGGGCCATTGCAAGAAAGCCCGAAATTTTGATATTTGACGATAGTTT
CTCAGCCCTTGACTATAAAACCGATAAGTTGCTGCGAGGCGAACTGAGACATCATGCCACAGACGCCACCATTATCATTG
TGGCTCAGCGCATCGGAACTATTAAGGATGCCGATAAAATTATTGTTTTAGATGAAGGCCGGATTGCCGGGATGGGCACA
CACCGCGAATTGATCAAAAAATGCGATTTATACAAAGAAATTGCCTATTCTCAACTCTCAAAGGAGGAACTGGAAAATGA
ATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(356-506)

ABC transporter transmembrane region (ABC_membrane)

(17-293)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7WVF7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

49.666

100

0.506