Detailed information NTG0867168

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: Q7W68_RS25105
• Genome accession: NZ_CP132065
• Coordinates: 4845098..4846447 (-)
• Length: 449 a.a.
• NCBI ID: WP_033733110.1
• Uniprot ID: -
• Organism: Bacillus mycoides strain PAMC 29538
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4840098..4851447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7W68_RS25080	-	4842671..4842775 (-)	105	Protein_4884	YafY family transcriptional regulator	-
Q7W68_RS25085	-	4842735..4843103 (+)	369	WP_234813448.1	VOC family protein	-
Q7W68_RS25090	hpf	4843207..4843749 (-)	543	WP_002089603.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
Q7W68_RS25095	cspC	4844070..4844267 (-)	198	WP_001990088.1	cold shock protein CspC	-
Q7W68_RS25100	-	4844394..4845098 (-)	705	WP_305926855.1	ComF family protein	-
Q7W68_RS25105	comFA	4845098..4846447 (-)	1350	WP_033733110.1	ATP-dependent helicase ComFA	Machinery gene
Q7W68_RS25110	-	4846578..4847882 (-)	1305	WP_305926856.1	NlpC/P60 family protein	-
Q7W68_RS25115	-	4848146..4848460 (-)	315	WP_002089608.1	helix-turn-helix domain-containing protein	-
Q7W68_RS25120	-	4848634..4849476 (-)	843	WP_002016143.1	DegV family protein	-
Q7W68_RS25125	-	4849715..4850350 (+)	636	WP_002143754.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 50897.30 Da
• Isoelectric Point: 9.5337

>NTDB_id=867168 Q7W68_RS25105 WP_033733110.1 4845098..4846447(-) (comFA) [Bacillus mycoides strain PAMC 29538]
MLAGRQLLLEELSSDLQNKLDHLKRNRDVVCVQGVIKKSSKYMCQRCGNIEQRLFVSLLCKRCNEVCTYCRKCITMGRVS
ECTVLVRGIAEISGESYLNPLQWEGVLSDGQELAAQSVVDAVKQKESFFIWAVCGAGKTEMLFRGIAEALQKGERVCIAT
PRTDVVLELAPRLQEVFPNINVAALYGGSLDREKDAALIVATTHQLLRYYRAFHVMIVDEIDAFPYHADKMLQYAVNEAM
KEKAARIYLTATPDEKWKRKLRSGKQKGVIISGRYHRHPLPVPIFRWCGNWKKGLIRKKIPRALLQWLNLYLSKRYPIFL
FVPHVRYVEEISQLLKSLNNQIDGVHAEDPARKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSSDEPHGDVIYFHYGKTEAMVRAKKHIQSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=867168 Q7W68_RS25105 WP_033733110.1 4845098..4846447(-) (comFA) [Bacillus mycoides strain PAMC 29538]
ATGTTAGCTGGTAGACAGTTACTGTTAGAAGAACTCTCTTCAGATTTGCAGAATAAATTGGATCATCTGAAAAGGAATCG
AGACGTCGTTTGTGTGCAAGGGGTAATTAAGAAGTCTTCAAAATATATGTGTCAGCGCTGCGGAAATATAGAGCAGCGAC
TATTTGTATCATTGCTATGTAAAAGGTGCAATGAAGTATGTACGTATTGCCGGAAATGTATAACGATGGGCAGGGTAAGT
GAATGTACTGTACTTGTTCGCGGGATTGCTGAAATAAGCGGAGAAAGTTATTTGAATCCGTTACAGTGGGAAGGCGTTTT
GTCTGACGGTCAGGAGTTAGCTGCGCAAAGTGTCGTTGACGCTGTTAAGCAGAAAGAATCATTTTTTATTTGGGCGGTGT
GCGGGGCTGGAAAAACAGAAATGTTGTTTCGCGGAATTGCAGAGGCACTACAAAAGGGAGAAAGAGTTTGTATTGCAACG
CCGAGAACGGACGTTGTACTTGAATTAGCACCAAGATTACAAGAAGTGTTTCCAAATATAAATGTAGCTGCTTTATACGG
AGGGAGTTTAGACCGAGAAAAAGATGCGGCGTTAATCGTTGCAACTACACATCAATTGTTACGTTATTATAGGGCGTTCC
ATGTCATGATTGTAGATGAGATAGATGCTTTTCCGTATCATGCAGATAAGATGTTGCAGTATGCAGTAAACGAAGCGATG
AAAGAGAAGGCAGCACGTATTTATTTAACTGCAACTCCAGATGAAAAGTGGAAGCGTAAGTTGCGAAGTGGTAAGCAAAA
AGGGGTTATTATTTCAGGACGATACCATCGTCATCCATTGCCAGTTCCGATATTTCGGTGGTGCGGAAATTGGAAAAAGG
GTCTTATACGTAAAAAAATTCCTCGTGCTTTATTACAATGGTTAAATCTGTACTTATCGAAACGATACCCCATTTTTCTA
TTTGTTCCTCATGTGCGATATGTAGAAGAAATTAGCCAGTTATTAAAATCATTAAACAATCAAATTGACGGTGTGCATGC
AGAAGATCCGGCGAGAAAAGAGAAGGTAGCAGCTTTCAGGAAAGGAGAAATTCCTTTATTAGTTACAACGACGATTTTGG
AACGAGGAGTAACTGTGAAAAATTTACAAGTCGCAGTTTTAGGGGCTGAGGAAGAAATATTTTCAGAAAGTGCTCTCGTT
CAAATTGCAGGGCGTGCTGGCAGAAGCTCTGATGAACCGCATGGAGATGTTATTTATTTTCATTATGGAAAGACAGAGGC
GATGGTGCGTGCGAAAAAACATATTCAAAGTATGAATAAGAATGCTAAAGAACAAGGATTGATAGATTGA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-409)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.567	98.218	0.497
comFA	Latilactobacillus sakei subsp. sakei 23K	41.206	88.641	0.365