Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   Q8W18_RS06030 Genome accession   NZ_CP132058
Coordinates   1214858..1215523 (+) Length   221 a.a.
NCBI ID   WP_306012001.1    Uniprot ID   -
Organism   Bacillus pumilus strain F12-21     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1209858..1220523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q8W18_RS06000 (Q8W18_06000) - 1210208..1211269 (+) 1062 WP_306011998.1 ABC transporter ATP-binding protein -
  Q8W18_RS06005 (Q8W18_06005) - 1211280..1212188 (+) 909 WP_370339229.1 ABC transporter ATP-binding protein -
  Q8W18_RS06010 (Q8W18_06010) - 1212297..1212584 (+) 288 WP_058014296.1 hypothetical protein -
  Q8W18_RS06015 (Q8W18_06015) - 1212722..1213300 (+) 579 WP_058014295.1 GNAT family N-acetyltransferase -
  Q8W18_RS06020 (Q8W18_06020) spxA 1213494..1213889 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  Q8W18_RS06025 (Q8W18_06025) - 1213930..1214595 (-) 666 WP_306012000.1 TerC family protein -
  Q8W18_RS19410 - 1214771..1214891 (+) 121 Protein_1134 hypothetical protein -
  Q8W18_RS06030 (Q8W18_06030) mecA 1214858..1215523 (+) 666 WP_306012001.1 adaptor protein MecA Regulator
  Q8W18_RS06035 (Q8W18_06035) cls 1215609..1217129 (+) 1521 WP_058014293.1 cardiolipin synthase -
  Q8W18_RS06040 (Q8W18_06040) - 1217292..1218452 (+) 1161 WP_306012002.1 competence protein CoiA -
  Q8W18_RS06045 (Q8W18_06045) pepF 1218667..1220493 (+) 1827 WP_306012003.1 oligoendopeptidase F -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26432.20 Da        Isoelectric Point: 3.9851

>NTDB_id=867037 Q8W18_RS06030 WP_306012001.1 1214858..1215523(+) (mecA) [Bacillus pumilus strain F12-21]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEENLDALLDDFQKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=867037 Q8W18_RS06030 WP_306012001.1 1214858..1215523(+) (mecA) [Bacillus pumilus strain F12-21]
ATGGAAATCGAAAGAATTAATGAACATACAGTGAAATTTTATATTTCCTACGGTGATATTGAAGACCGCGGATTTGACCG
TGAAGAGATTTGGTATAATCGTGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTTGAGGGGCCGCTTTGGATTCAAGTGCAGGCACTTGATAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAATCTAGATGCACT
GCTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGATCATAATGAGAAGGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCACAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATACGGTCAGCTGATTATCGAAGGAAATGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

77.376

100

0.774