Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   QFX49_RS07295 Genome accession   NZ_CP132038
Coordinates   1458658..1459701 (+) Length   347 a.a.
NCBI ID   WP_304984651.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 1.6     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1453658..1464701
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QFX49_RS07265 - 1454028..1454138 (+) 111 WP_001790257.1 hypothetical protein -
  QFX49_RS07270 - 1454167..1454580 (+) 414 WP_001549145.1 hypothetical protein -
  QFX49_RS07275 - 1455011..1455997 (-) 987 WP_000999713.1 aromatic acid exporter family protein -
  QFX49_RS07280 map 1456584..1457342 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  QFX49_RS07285 - 1457559..1457945 (+) 387 WP_001110179.1 hypothetical protein -
  QFX49_RS07290 liaF 1457960..1458661 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  QFX49_RS07295 vraS 1458658..1459701 (+) 1044 WP_304984651.1 sensor histidine kinase Regulator
  QFX49_RS07300 vraR 1459691..1460320 (+) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  QFX49_RS07305 - 1460436..1461653 (-) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  QFX49_RS07310 - 1461931..1462206 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  QFX49_RS07315 - 1462213..1462677 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  QFX49_RS07320 - 1462824..1463024 (+) 201 WP_000180461.1 DUF1128 family protein -
  QFX49_RS07325 - 1463027..1464283 (+) 1257 WP_001795438.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40074.61 Da        Isoelectric Point: 6.0577

>NTDB_id=866917 QFX49_RS07295 WP_304984651.1 1458658..1459701(+) (vraS) [Staphylococcus aureus strain 1.6]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKM
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=866917 QFX49_RS07295 WP_304984651.1 1458658..1459701(+) (vraS) [Staphylococcus aureus strain 1.6]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTTTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGATG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
TATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997