Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   Q8Z25_RS15440 Genome accession   NZ_CP131998
Coordinates   3151110..3151736 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain MRSN791417     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3146110..3156736
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q8Z25_RS15420 (Q8Z25_15425) - 3146509..3148269 (-) 1761 WP_017384808.1 Lon protease family protein -
  Q8Z25_RS15425 (Q8Z25_15430) matP 3148456..3148908 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  Q8Z25_RS15430 (Q8Z25_15435) ompA 3148974..3150026 (-) 1053 WP_017694761.1 porin OmpA -
  Q8Z25_RS15435 (Q8Z25_15440) sulA 3150383..3150892 (-) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  Q8Z25_RS15440 (Q8Z25_15445) sxy/tfoX 3151110..3151736 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  Q8Z25_RS15445 (Q8Z25_15450) yccS 3151693..3153855 (-) 2163 WP_058689487.1 YccS family putative transporter -
  Q8Z25_RS15450 (Q8Z25_15455) - 3153874..3154320 (-) 447 WP_058689486.1 YccF domain-containing protein -
  Q8Z25_RS15455 (Q8Z25_15460) helD 3154443..3156497 (+) 2055 WP_305869305.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=866583 Q8Z25_RS15440 WP_017384804.1 3151110..3151736(+) (sxy/tfoX) [Enterobacter hormaechei strain MRSN791417]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=866583 Q8Z25_RS15440 WP_017384804.1 3151110..3151736(+) (sxy/tfoX) [Enterobacter hormaechei strain MRSN791417]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572