Detailed information NTG0866402

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHQ26_RS02970
• Genome accession: NZ_CP148155
• Coordinates: 581662..582612 (-)
• Length: 316 a.a.
• NCBI ID: WP_002867402.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain Z1323HCJ0069
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 576662..587612

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHQ26_RS02935 (WHQ26_02935)	ccoS	576850..577056 (+)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
WHQ26_RS02940 (WHQ26_02940)	-	577079..577381 (-)	303	WP_002852762.1	cytochrome c	-
WHQ26_RS02945 (WHQ26_02945)	gmhB	577462..578023 (+)	562	Protein_564	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHQ26_RS02950 (WHQ26_02950)	rfaD	578024..578977 (+)	954	WP_234728994.1	ADP-glyceromanno-heptose 6-epimerase	-
WHQ26_RS02955 (WHQ26_02955)	rfaE1	578970..580355 (+)	1386	WP_002867399.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHQ26_RS02960 (WHQ26_02960)	gmhA	580352..580912 (+)	561	WP_002867400.1	D-sedoheptulose 7-phosphate isomerase	-
WHQ26_RS02965 (WHQ26_02965)	-	580912..581676 (+)	765	WP_002867401.1	glycosyltransferase family 25 protein	-
WHQ26_RS02970 (WHQ26_02970)	waaF	581662..582612 (-)	951	WP_002867402.1	lipopolysaccharide heptosyltransferase II	Regulator
WHQ26_RS02975 (WHQ26_02975)	-	582671..583492 (+)	822	WP_002867403.1	glycosyltransferase family 2 protein	-
WHQ26_RS02980 (WHQ26_02980)	-	583563..584519 (+)	957	WP_002867404.1	UDP-glucuronic acid decarboxylase family protein	-
WHQ26_RS02985 (WHQ26_02985)	-	584525..585826 (+)	1302	WP_338851171.1	UDP-glucose/GDP-mannose dehydrogenase family protein	-
WHQ26_RS02990 (WHQ26_02990)	galE	585823..586797 (+)	975	WP_146263329.1	UDP-glucose 4-epimerase GalE	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36324.91 Da
• Isoelectric Point: 10.3207

>NTDB_id=866402 WHQ26_RS02970 WP_002867402.1 581662..582612(-) (waaF) [Campylobacter jejuni strain Z1323HCJ0069]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFKSPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=866402 WHQ26_RS02970 WP_002867402.1 581662..582612(-) (waaF) [Campylobacter jejuni strain Z1323HCJ0069]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTAAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACTATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCTGAAGTGATTTTAAAGGCAATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.652	99.051	0.918