Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   Q4S45_RS16905 Genome accession   NZ_CP131935
Coordinates   3698474..3698869 (-) Length   131 a.a.
NCBI ID   WP_305506245.1    Uniprot ID   A0AAT9WCQ0
Organism   Massilia sp. R2A-15     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3693474..3703869
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q4S45_RS16890 (Q4S45_16890) - 3695171..3697468 (-) 2298 WP_305506239.1 methyl-accepting chemotaxis protein -
  Q4S45_RS16895 (Q4S45_16895) - 3697541..3698074 (-) 534 WP_305506241.1 chemotaxis protein CheW -
  Q4S45_RS16900 (Q4S45_16900) - 3698076..3698450 (-) 375 WP_305506243.1 PleD family two-component system response regulator -
  Q4S45_RS16905 (Q4S45_16905) pilG 3698474..3698869 (-) 396 WP_305506245.1 PleD family two-component system response regulator Regulator
  Q4S45_RS16910 (Q4S45_16910) - 3698976..3699128 (-) 153 WP_167074514.1 rubredoxin -
  Q4S45_RS16915 (Q4S45_16915) - 3699227..3700057 (+) 831 WP_305506246.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  Q4S45_RS16920 (Q4S45_16920) hemL 3700084..3701379 (+) 1296 WP_305506247.1 glutamate-1-semialdehyde 2,1-aminomutase -
  Q4S45_RS16925 (Q4S45_16925) - 3701535..3702806 (+) 1272 WP_305506249.1 NRAMP family divalent metal transporter -
  Q4S45_RS16930 (Q4S45_16930) - 3702913..3703404 (+) 492 WP_305506251.1 hypothetical protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14244.43 Da        Isoelectric Point: 7.9062

>NTDB_id=866381 Q4S45_RS16905 WP_305506245.1 3698474..3698869(-) (pilG) [Massilia sp. R2A-15]
MTNSQQPTGLKIMVIDDSSTIRRSAEIFLTQAGYQVVLADDGFDALAKINDHHPALVFCDILMPRLDGYQTCALIKKSAR
FHATPVLMLSSKDGLFDRARGAMVGSSAYLTKPFSKDSLLAAVREHTAGLT

Nucleotide


Download         Length: 396 bp        

>NTDB_id=866381 Q4S45_RS16905 WP_305506245.1 3698474..3698869(-) (pilG) [Massilia sp. R2A-15]
ATGACGAACTCGCAGCAACCCACCGGTTTGAAGATCATGGTGATCGACGACAGCAGCACGATCCGCCGCTCCGCCGAGAT
CTTCCTGACCCAGGCCGGCTACCAGGTCGTGCTGGCCGACGACGGCTTCGACGCCCTCGCCAAGATCAACGACCACCACC
CGGCGTTGGTATTTTGCGACATCCTCATGCCGCGCCTCGACGGCTACCAGACTTGCGCACTCATTAAGAAGAGCGCCCGC
TTCCATGCCACGCCGGTGCTCATGCTCTCGTCCAAGGACGGCCTGTTCGACCGCGCGCGCGGCGCCATGGTCGGTTCCTC
GGCCTACCTTACCAAACCATTCAGCAAAGACAGCTTGCTGGCGGCCGTGCGCGAACATACCGCCGGCCTGACCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.333

91.603

0.58